(Q35569664)

8 August 2017

title

Heat shock reduces stalled RNA polymerase II and nucleosome turnover genome-wide (English)

1 reference

8 August 2017

Sheila S Teves

1

1 reference

8 August 2017

Steven Henikoff

series ordinal

2

1 reference

8 August 2017

language of work or name

1 reference

1 November 2011

1 reference

8 August 2017

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8 August 2017

volume

25

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8 August 2017

issue

22

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8 August 2017

page(s)

2387-2397

1 reference

describes a project that uses

8 August 2017

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC3222904/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

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27 July 2018

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27 July 2018

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Nucleosome fragility reveals novel functional states of chromatin and poises genes for activation

27 July 2018

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27 July 2018

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Pausing of RNA polymerase II disrupts DNA-specified nucleosome organization to enable precise gene regulation

27 July 2018

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27 July 2018

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Heat shock factors: integrators of cell stress, development and lifespan.

27 July 2018

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RNA polymerase complexes cooperate to relieve the nucleosomal barrier and evict histones

27 July 2018

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27 July 2018

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27 July 2018

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Genome-wide kinetics of nucleosome turnover determined by metabolic labeling of histones

27 July 2018

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H2A.Z-containing nucleosomes mediate the thermosensory response in Arabidopsis.

27 July 2018

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Functional interplay between chromatin remodeling complexes RSC, SWI/SNF and ISWI in regulation of yeast heat shock genes

27 July 2018

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27 July 2018

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27 July 2018

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Heat-shock factor 1 controls genome-wide acetylation in heat-shocked cells

27 July 2018

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B2 RNA and Alu RNA repress transcription by disrupting contacts between RNA polymerase II and promoter DNA within assembled complexes

27 July 2018

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Genome-wide profiling of salt fractions maps physical properties of chromatin

27 July 2018

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Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters

27 July 2018

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NELF-mediated stalling of Pol II can enhance gene expression by blocking promoter-proximal nucleosome assembly

27 July 2018

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Rapid, transcription-independent loss of nucleosomes over a large chromatin domain at Hsp70 loci

27 July 2018

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Nucleosome organization in the Drosophila genome.

27 July 2018

1 reference

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Dynamic remodeling of individual nucleosomes across a eukaryotic genome in response to transcriptional perturbation

27 July 2018

1 reference

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NELF and GAGA factor are linked to promoter-proximal pausing at many genes in Drosophila

27 July 2018

1 reference

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Human Alu RNA is a modular transacting repressor of mRNA transcription during heat shock

27 July 2018

1 reference

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Stress-dependent dynamics of global chromatin remodeling in yeast: dual role for SWI/SNF in the heat shock stress response

27 July 2018

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RNA polymerase is poised for activation across the genome

27 July 2018

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27 July 2018

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Full and partial genome-wide assembly and disassembly of the yeast transcription machinery in response to heat shock

27 July 2018

1 reference

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Sequence-resolved detection of pausing by single RNA polymerase molecules.

27 July 2018

1 reference

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Rapid spontaneous accessibility of nucleosomal DNA.

27 July 2018

1 reference

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Quantitation of RNA polymerase II and its transcription factors in an HeLa cell: little soluble holoenzyme but significant amounts of polymerases attached to the nuclear substructure

27 July 2018

1 reference

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Crystal structure of the nucleosome core particle at 2.8 A resolution

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222904

27 July 2018

The heat-shock response

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222904

RNA polymerase II pauses at the 5' end of the transcriptionally induced Drosophila hsp70 gene

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222904

Effect of estradiol on rat uterus DNA-dependent RNA polymerases. Studies on solubilized enzymes

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222904

The effect of heat shock on RNA synthesis in Drosophila tissues

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222904

RNA synthesis in the Drosophila melanogaster puffs

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222904

Fractionation of nucleosomes by salt elution from micrococcal nuclease-digested nuclei

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222904

Localization of RNA polymerase in polytene chromosomes of Drosophila melanogaster

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222904

The induction of gene activity in drosophila by heat shock

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222904

H2A.Z nucleosomes enriched over active genes are homotypic

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222904

Synergistic action of RNA polymerases in overcoming the nucleosomal barrier.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222904

RNA polymerase II activity is located on the surface of protein-rich transcription factories

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222904

Genome-scale profiling of histone H3.3 replacement patterns.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222904

Different populations of RNA polymerase II in living mammalian cells.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222904

The SINE-encoded mouse B2 RNA represses mRNA transcription in response to heat shock

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3222904

Structure of the chromatosome, a chromatin particle containing 160 base pairs of DNA and all the histones

26 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22085965

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1101/GAD.177675.111

1 reference

8 August 2017

1 reference

8 August 2017

1 reference