(Q35575274)

8 August 2017

title

The contribution of alu elements to mutagenic DNA double-strand break repair (English)

1 reference

8 August 2017

Maria E Morales

1

1 reference

8 August 2017

Travis B White

2

1 reference

8 August 2017

Vincent A Streva

3

1 reference

8 August 2017

Cecily B DeFreece

4

1 reference

8 August 2017

Dale J Hedges

5

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8 August 2017

Prescott L Deininger

6

1 reference

8 August 2017

language of work or name

1 reference

11 March 2015

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8 August 2017

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8 August 2017

volume

11

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8 August 2017

issue

3

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8 August 2017

page(s)

e1005016

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Creative Commons Attribution 4.0 International

8 August 2017

copyright license

start time

11 March 2015

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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Sources of DNA double-strand breaks and models of recombinational DNA repair

12 July 2018

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The Alu-rich genomic architecture of SPAST predisposes to diverse and functionally distinct disease-associated CNV alleles

12 July 2018

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Translocation junctions in TCF3-PBX1 acute lymphoblastic leukemia/lymphoma cluster near transposable elements.

12 July 2018

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Microhomology directs diverse DNA break repair pathways and chromosomal translocations

12 July 2018

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Repetitive elements and enforced transcriptional repression co-operate to enhance DNA methylation spreading into a promoter CpG-island

12 July 2018

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Evaluation of a droplet digital polymerase chain reaction format for DNA copy number quantification

12 July 2018

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High-throughput droplet digital PCR system for absolute quantitation of DNA copy number

12 July 2018

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Double-strand break end resection and repair pathway choice

12 July 2018

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Multiple Recurrent De Novo CNVs, Including Duplications of the 7q11.23 Williams Syndrome Region, Are Strongly Associated with Autism

12 July 2018

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Rare pathogenic microdeletions and tandem duplications are microhomology-mediated and stimulated by local genomic architecture

12 July 2018

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Human Rad52-mediated homology search and annealing occurs by continuous interactions between overlapping nucleoprotein complexes

12 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4356517

MMEJ repair of double-strand breaks (director's cut): deleted sequences and alternative endings

12 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4356517

Small deletion variants have stable breakpoints commonly associated with alu elements.

12 July 2018

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Alternative-NHEJ is a mechanistically distinct pathway of mammalian chromosome break repair

12 July 2018

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Protein roadblocks and helix discontinuities are barriers to the initiation of mismatch repair

12 July 2018

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Inviting instability: Transposable elements, double-strand breaks, and the maintenance of genome integrity.

12 July 2018

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Human genomic deletions mediated by recombination between Alu elements.

12 July 2018

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12 July 2018

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Distinct roles for the Saccharomyces cerevisiae mismatch repair proteins in heteroduplex rejection, mismatch repair and nonhomologous tail removal

12 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4356517

MLL: a histone methyltransferase disrupted in leukemia

12 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4356517

Heteroduplex rejection during single-strand annealing requires Sgs1 helicase and mismatch repair proteins Msh2 and Msh6 but not Pms1

12 July 2018

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RNA truncation by premature polyadenylation attenuates human mobile element activity

12 July 2018

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An Alu Transposition Model for the Origin and Expansion of Human Segmental Duplications

12 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4356517

The role of Alu repeat clusters as mediators of recurrent chromosomal aberrations in tumors

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4356517

DNA double-strand breaks: signaling, repair and the cancer connection

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4356517

Initial sequencing and analysis of the human genome

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4356517

Homologous and nonhomologous recombination resulting in deletion: effects of p53 status, microhomology, and repetitive DNA length and orientation

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4356517

Alu repeats and human disease

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4356517

The role of the mismatch repair machinery in regulating mitotic and meiotic recombination between diverged sequences in yeast.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4356517

Double-strand break repair by interchromosomal recombination: suppression of chromosomal translocations

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4356517

The partial tandem duplication of ALL1 (MLL) is consistently generated by Alu-mediated homologous recombination in acute myeloid leukemia

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4356517

Dual roles for DNA sequence identity and the mismatch repair system in the regulation of mitotic crossing-over in yeast

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4356517

Two different types of double-strand breaks in Saccharomyces cerevisiae are repaired by similar RAD52-independent, nonhomologous recombination events

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4356517

Hypermutability and mismatch repair deficiency in RER+ tumor cells

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4356517

Human chromosome 3 corrects mismatch repair deficiency and microsatellite instability and reduces N-methyl-N'-nitro-N-nitrosoguanidine tolerance in colon tumor cells with homozygous hMLH1 mutation

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4356517

One short well conserved region of Alu-sequences is involved in human gene rearrangements and has homology with prokaryotic chi.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4356517

Founding mutations and Alu-mediated recombination in hereditary colon cancer

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4356517

Mutation in LDL receptor: Alu-Alu recombination deletes exons encoding transmembrane and cytoplasmic domains

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4356517

Recombinational biases in the rearranged C1-inhibitor genes of hereditary angioedema patients

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4356517

Quantitation of targets for PCR by use of limiting dilution

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4356517

Detection of variations and identifying genomic breakpoints for large deletions in the LDLR by Ion Torrent semiconductor sequencing

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4356517

Analysis of a breakpoint cluster reveals insight into the mechanism of intrachromosomal amplification in a lymphoid malignancy

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4356517

Alu-Alu recombination underlies the vast majority of large VHL germline deletions: Molecular characterization and genotype-phenotype correlations in VHL patients

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4356517

Different molecular mechanisms underlie genomic deletions in the MLH1 Gene

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4356517

MLL self fusion mediated by Alu repeat homologous recombination and prognosis of AML-M4/M5 subtypes

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4356517

Optimal design of oligonucleotide microarrays for measurement of DNA copy-number

26 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1005016

Distinct patterns of germ-line deletions inMLH1 andMSH2: the implication of Alu repetitive element in the genetic etiology of Lynch syndrome (HNPCC)

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1005016

Chromosomal translocation mechanisms at intronic alu elements in mammalian cells

21 January 2018

1 reference

12 December 2020

The 5' region of the MSH2 gene involved in hereditary non-polyposis colorectal cancer contains a high density of recombinogenic sequences

1 reference

12 December 2020

Identification of mutations in the Bruton's tyrosine kinase gene, including a novel genomic rearrangements resulting in large deletion, in Korean X-linked agammaglobulinemia patients

1 reference

12 December 2020

A novel reporter for intrachromosomal homoeologous recombination in Arabidopsis thaliana

1 reference

12 December 2020

High-frequency Alu-mediated genomic recombination/deletion within the caspase-activated DNase gene in human hepatoma

1 reference

12 December 2020

AluElements: Repetitive DNA as Facilitators of Chromosomal Rearrangement

1 reference

12 December 2020

Non-recurrent 17p11.2 deletions are generated by homologous and non-homologous mechanisms

1 reference

12 December 2020

Identification of novel germline hMLH1 mutations including a 22 kb Alu-mediated deletion in patients with familial colorectal cancer

1 reference

12 December 2020

10.1371/JOURNAL.PGEN.1005016

Identifiers

DOI

1 reference

8 August 2017

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8 August 2017

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