(Q35587942)

9 August 2017

title

Intramolecular circularization increases efficiency of RNA sequencing and enables CLIP-Seq of nuclear RNA from human cells (English)

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9 August 2017

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Yongjun Chu

1

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9 August 2017

Tao Wang

2

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9 August 2017

David Dodd

3

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9 August 2017

Yang Xie

4

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9 August 2017

Bethany A Janowski

5

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9 August 2017

David R Corey

6

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9 August 2017

language of work or name

English

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publication date

26 March 2015

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9 August 2017

published in

Nucleic Acids Research

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9 August 2017

volume

43

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9 August 2017

issue

11

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9 August 2017

page(s)

e75

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Creative Commons Attribution 4.0 International

9 August 2017

copyright license

start time

4 October 2016

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April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

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12 July 2018

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12 July 2018

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12 July 2018

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Mutational and fitness landscapes of an RNA virus revealed through population sequencing

12 July 2018

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12 July 2018

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12 July 2018

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Circular RNAs are a large class of animal RNAs with regulatory potency

12 July 2018

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Ago HITS-CLIP expands understanding of Kaposi's sarcoma-associated herpesvirus miRNA function in primary effusion lymphomas

12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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Structural bias in T4 RNA ligase-mediated 3'-adapter ligation

12 July 2018

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Digital RNA sequencing minimizes sequence-dependent bias and amplification noise with optimized single-molecule barcodes

12 July 2018

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12 July 2018

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12 July 2018

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Genome-wide identification of microRNA targets in human ES cells reveals a role for miR-302 in modulating BMP response

12 July 2018

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The human mitochondrial transcriptome

12 July 2018

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T4 RNA ligase 2 truncated active site mutants: improved tools for RNA analysis

12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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Deep sequencing of the small RNA transcriptome of normal and malignant human B cells identifies hundreds of novel microRNAs

12 July 2018

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Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP

12 July 2018

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Digital transcriptome profiling using selective hexamer priming for cDNA synthesis

12 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4477644

Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps

12 July 2018

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mRNA-Seq whole-transcriptome analysis of a single cell

12 July 2018

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12 July 2018

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12 July 2018

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Characterization of RNase R-digested cellular RNA source that consists of lariat and circular RNAs from pre-mRNA splicing.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4477644

DNA flexibility studied by covalent closure of short fragments into circles

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4477644

Entropic Contributions to Rate Accelerations in Enzymic and Intramolecular Reactions and the Chelate Effect

12 July 2018

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T4-induced RNA ligase joins single-stranded oligoribonucleotides

12 July 2018

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Argonaute proteins couple chromatin silencing to alternative splicing.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4477644

Amplification-free whole-genome bisulfite sequencing by post-bisulfite adaptor tagging.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4477644

A quantitative analysis of CLIP methods for identifying binding sites of RNA-binding proteins

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4477644

Microbial environments confound antibiotic efficacy

26 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKV213

Template-directed oligonucleotide strand ligation, covalent intramolecular DNA circularization and catenation using click chemistry

21 January 2018

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12 December 2020

Intramolecular catalysis in the reactions of nucleophilic reagents with aspirin

1 reference

12 December 2020

Cyclization of globular DNA. Implications for DNA-DNA interactions in vivo

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12 December 2020

Structure and mechanism in intramolecular catalysis. Hydrolysis of substituted aspirins

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12 December 2020

Intramolecular nucleophilic catalysis in the hydrolysis of substituted aspirin acids

1 reference

12 December 2020

Rolling circle amplification-RACE: a method for simultaneous isolation of 5' and 3' cDNA ends from amplified cDNA templates

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12 December 2020

Identifiers

DOI

10.1093/NAR/GKV213

1 reference

release_3myki5pxorcxxnjznjqtnhmgfe

9 August 2017

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/3myki5pxorcxxnjznjqtnhmgfe

24 November 2022

mapped directly with Wikidata item

PMC publication ID

4477644

1 reference

9 August 2017

1 reference