(Q35601315)

9 August 2017

title

PLIP: fully automated protein-ligand interaction profiler (English)

1 reference

9 August 2017

5

Michael Schroeder

1 reference

9 August 2017

Sebastian Salentin

1

1 reference

9 August 2017

Sven Schreiber

series ordinal

2

1 reference

9 August 2017

V Joachim Haupt

series ordinal

3

1 reference

9 August 2017

Melissa F Adasme

series ordinal

4

1 reference

9 August 2017

language of work or name

English

0 references

publication date

14 April 2015

1 reference

9 August 2017

published in

Nucleic Acids Research

1 reference

9 August 2017

volume

43

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9 August 2017

issue

W1

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9 August 2017

page(s)

W443-7

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Creative Commons Attribution 4.0 International

9 August 2017

copyright license

start time

11 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Polypharmacology rescored: protein-ligand interaction profiles for remote binding site similarity assessment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489249

GalaxySite: ligand-binding-site prediction by using molecular docking

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489249

GIANT: pattern analysis of molecular interactions in 3D structures of protein-small ligand complexes.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489249

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489249

ProBiS-database: precalculated binding site similarities and local pairwise alignments of PDB structures

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489249

LigPlot+: multiple ligand-protein interaction diagrams for drug discovery

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489249

Ligand-induced fit affects binding modes and provokes changes in crystal packing of aldose reductase

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489249

SwissDock, a protein-small molecule docking web service based on EADock DSS

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489249

Old friends in new guise: repositioning of known drugs with structural bioinformatics

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489249

BINANA: a novel algorithm for ligand-binding characterization

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489249

Pybel: a Python wrapper for the OpenBabel cheminformatics toolkit

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489249

2D depiction of protein-ligand complexes.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489249

Relibase: design and development of a database for comprehensive analysis of protein-ligand interactions

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489249

Automated analysis of interatomic contacts in proteins

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489249

ProBiS-ligands: a web server for prediction of ligands by examination of protein binding sites.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489249

Binding affinity prediction for protein-ligand complexes based on β contacts and B factor.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489249

Drug Promiscuity in PDB: Protein Binding Site Similarity Is Key

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489249

Latest developments in molecular docking: 2010-2011 in review

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489249

Encoding protein-ligand interaction patterns in fingerprints and graphs.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489249

PLI: a web-based tool for the comparison of protein-ligand interactions observed on PDB structures

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489249

PROLIX: rapid mining of protein-ligand interactions in large crystal structure databases.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489249

CREDO: a protein-ligand interaction database for drug discovery.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489249

The Protein Data Bank: a historical perspective.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489249

26 September 2018

Identifiers

DOI

10.1093/NAR/GKV315

1 reference

journals/nar/SalentinSHAS15

9 August 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

9 August 2017

1 reference