Home
Random
Nearby
Log in
Settings
Donate
About Wikidata
Disclaimers
Search
(Q35604047)
Watch
English
Systematic identification of regulatory elements in conserved 3' UTRs of human transcripts
scientific article published on 20 March 2014
In more languages
default for all languages
No label defined
No description defined
edit
Statements
instance of
scholarly article
1 reference
stated in
Europe PubMed Central
PMC publication ID
4430845
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24656821%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 March 2020
title
Systematic identification of regulatory elements in conserved 3' UTRs of human transcripts
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
4430845
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24656821%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 March 2020
author
Panos Oikonomou
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
4430845
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24656821%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 March 2020
Hani Goodarzi
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMC publication ID
4430845
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24656821%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 March 2020
author name string
Saeed Tavazoie
series ordinal
3
1 reference
stated in
Europe PubMed Central
PMC publication ID
4430845
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24656821%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 March 2020
publication date
20 March 2014
1 reference
stated in
Europe PubMed Central
PMC publication ID
4430845
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24656821%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 March 2020
published in
Cell Reports
1 reference
stated in
Europe PubMed Central
PMC publication ID
4430845
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24656821%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 March 2020
volume
7
1 reference
stated in
Europe PubMed Central
PMC publication ID
4430845
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24656821%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 March 2020
issue
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
4430845
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24656821%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 March 2020
page(s)
281-292
1 reference
stated in
Europe PubMed Central
PMC publication ID
4430845
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24656821%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 March 2020
cites work
A compendium of RNA-binding motifs for decoding gene regulation.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
Prediction of clustered RNA-binding protein motif sites in the mammalian genome.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
Systematic dissection of regulatory motifs in 2000 predicted human enhancers using a massively parallel reporter assay
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
Systematic reconstruction of RNA functional motifs with high-throughput microfluidics
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
An integrated encyclopedia of DNA elements in the human genome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
Inferring gene regulatory logic from high-throughput measurements of thousands of systematically designed promoters
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
Systematic discovery of structural elements governing stability of mammalian messenger RNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
Systematic dissection and optimization of inducible enhancers in human cells using a massively parallel reporter assay
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
HITS-CLIP: panoramic views of protein-RNA regulation in living cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
Integrative regulatory mapping indicates that the RNA-binding protein HuR couples pre-mRNA processing and mRNA stability
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
RBPDB: a database of RNA-binding specificities
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
RNAcontext: a new method for learning the sequence and structure binding preferences of RNA-binding proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
Predicting in vivo binding sites of RNA-binding proteins using mRNA secondary structure
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
RNA processing and its regulation: global insights into biological networks
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
Rapid and systematic analysis of the RNA recognition specificities of RNA-binding proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
Discovering structural cis-regulatory elements by modeling the behaviors of mRNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
RNA and disease
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
mRNA localization: gene expression in the spatial dimension
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
MicroRNAs: target recognition and regulatory functions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
Diverse RNA-binding proteins interact with functionally related sets of RNAs, suggesting an extensive regulatory system
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
Cell-free selection of RNA-binding proteins using in vitro compartmentalization
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
RNA-binding proteins in human genetic disease
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
Proliferating cells express mRNAs with shortened 3' untranslated regions and fewer microRNA target sites
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
A universal framework for regulatory element discovery across all genomes and data types
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
RNA-binding proteins: modular design for efficient function
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
hnRNP-U enhances the expression of specific genes by stabilizing mRNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
Effects of Dicer and Argonaute down-regulation on mRNA levels in human HEK293 cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
Revealing posttranscriptional regulatory elements through network-level conservation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
The widespread impact of mammalian MicroRNAs on mRNA repression and evolution
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
A combinatorial code for splicing silencing: UAGG and GGGG motifs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
Human MicroRNA targets
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
MicroRNAs: small RNAs with a big role in gene regulation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
A KH domain RNA binding protein, KSRP, promotes ARE-directed mRNA turnover by recruiting the degradation machinery
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
Whole-genome discovery of transcription factor binding sites by network-level conservation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
Role of microRNAs in plant and animal development
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
Alternative pre-mRNA splicing and proteome expansion in metazoans
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
Delivering messages from the 3' end.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
Identifying mRNA subsets in messenger ribonucleoprotein complexes by using cDNA arrays
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
27 July 2018
Massively parallel functional dissection of mammalian enhancers in vivo
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
25 September 2018
Direct targeting of Sec23a by miR-200s influences cancer cell secretome and promotes metastatic colonization
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
25 September 2018
A genomic predictor of response and survival following taxane-anthracycline chemotherapy for invasive breast cancer.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
25 September 2018
Computational prediction of RNA structural motifs involved in post-transcriptional regulatory processes.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
25 September 2018
PAR-CliP--a method to identify transcriptome-wide the binding sites of RNA binding proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
25 September 2018
Origins and Mechanisms of miRNAs and siRNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
25 September 2018
Attenuation of leakiness in doxycycline-inducible expression via incorporation of 3' AU-rich mRNA destabilizing elements
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
25 September 2018
RNA-binding proteins and post-transcriptional gene regulation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
25 September 2018
RNA regulons: coordination of post-transcriptional events
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
25 September 2018
From birth to death: the complex lives of eukaryotic mRNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
25 September 2018
Fast and systematic genome-wide discovery of conserved regulatory elements using a non-alignment based approach
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
25 September 2018
MicroRNAs: genomics, biogenesis, mechanism, and function
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4430845
retrieved
25 September 2018
Identifiers
DOI
10.1016/J.CELREP.2014.03.001
1 reference
stated in
Europe PubMed Central
PMC publication ID
4430845
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24656821%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 March 2020
PMC publication ID
4430845
1 reference
stated in
Europe PubMed Central
PMC publication ID
4430845
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24656821%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 March 2020
PubMed publication ID
24656821
1 reference
stated in
Europe PubMed Central
PMC publication ID
4430845
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24656821%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 March 2020
ResearchGate publication ID
261032956
0 references
Sitelinks
Wikipedia
(0 entries)
edit
Wikibooks
(0 entries)
edit
Wikinews
(0 entries)
edit
Wikiquote
(0 entries)
edit
Wikisource
(0 entries)
edit
Wikiversity
(0 entries)
edit
Wikivoyage
(0 entries)
edit
Wiktionary
(0 entries)
edit
Multilingual sites
(0 entries)
edit