(Q35609131)

9 August 2017

title

Complexities due to single-stranded RNA during antibody detection of genomic rna:dna hybrids (English)

1 reference

9 August 2017

Zheng Z Zhang

1

1 reference

9 August 2017

Nicholas R Pannunzio

2

1 reference

9 August 2017

Chih-Lin Hsieh

3

1 reference

9 August 2017

Kefei Yu

4

1 reference

9 August 2017

Michael R Lieber

5

1 reference

9 August 2017

publication date

8 April 2015

1 reference

9 August 2017

1 reference

9 August 2017

volume

8

1 reference

9 August 2017

page(s)

127

1 reference

Creative Commons Attribution 4.0 International

9 August 2017

copyright license

start time

8 April 2015

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

exact match

https://scigraph.springernature.com/pub.10.1186/s13104-015-1092-1

0 references

cites work

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The strength of an Ig switch region is determined by its ability to drive R loop formation and its number of WGCW sites

12 July 2018

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Arginine methylation facilitates the recruitment of TOP3B to chromatin to prevent R loop accumulation.

12 July 2018

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The THO complex component Thp2 counteracts telomeric R-loops and telomere shortening

12 July 2018

1 reference

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GC skew at the 5' and 3' ends of human genes links R-loop formation to epigenetic regulation and transcription termination

12 July 2018

1 reference

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The sub-nanomolar binding of DNA-RNA hybrids by the single-chain Fv fragment of antibody S9.6.

12 July 2018

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R-loop stabilization represses antisense transcription at the Arabidopsis FLC locus.

12 July 2018

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Detection and characterization of R-loops at the murine immunoglobulin Sα region

12 July 2018

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R-loop formation is a distinctive characteristic of unmethylated human CpG island promoters

12 July 2018

1 reference

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DNA-RNA hybrid formation mediates RNAi-directed heterochromatin formation.

12 July 2018

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R-loop-mediated genome instability in mRNA cleavage and polyadenylation mutants

12 July 2018

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RNase H and multiple RNA biogenesis factors cooperate to prevent RNA:DNA hybrids from generating genome instability

12 July 2018

1 reference

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Overlapping activation-induced cytidine deaminase hotspot motifs in Ig class-switch recombination

12 July 2018

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Human senataxin resolves RNA/DNA hybrids formed at transcriptional pause sites to promote Xrn2-dependent termination

12 July 2018

1 reference

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Yeast Sen1 helicase protects the genome from transcription-associated instability.

12 July 2018

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Loss of Topoisomerase I leads to R-loop-mediated transcriptional blocks during ribosomal RNA synthesis

12 July 2018

1 reference

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G clustering is important for the initiation of transcription-induced R-loops in vitro, whereas high G density without clustering is sufficient thereafter

12 July 2018

1 reference

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Altered kinetics of nonhomologous end joining and class switch recombination in ligase IV-deficient B cells

12 July 2018

1 reference

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Mechanism of R-loop formation at immunoglobulin class switch sequences

12 July 2018

1 reference

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Sequence dependence of chromosomal R-loops at the immunoglobulin heavy-chain Smu class switch region

12 July 2018

1 reference

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Evolution of the immunoglobulin heavy chain class switch recombination mechanism

12 July 2018

1 reference

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An antibody-based microarray assay for small RNA detection

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393563

Downstream boundary of chromosomal R-loops at murine switch regions: implications for the mechanism of class switch recombination

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393563

Fine-structure analysis of activation-induced deaminase accessibility to class switch region R-loops

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393563

Nucleic acid structures and enzymes in the immunoglobulin class switch recombination mechanism

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393563

R-loops at immunoglobulin class switch regions in the chromosomes of stimulated B cells

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393563

High frequency class switching of an IgM+ B lymphoma clone CH12F3 to IgA+ cells.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393563

RNA:DNA complex formation upon transcription of immunoglobulin switch regions: implications for the mechanism and regulation of class switch recombination

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393563

DNA sequences at immunoglobulin switch region recombination sites

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393563

Transcription induces the formation of a stable RNA.DNA hybrid in the immunoglobulin alpha switch region.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393563

Strand specificity in the transcriptional targeting of recombination at immunoglobulin switch sequences

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393563

Characterization of monoclonal antibody to DNA.RNA and its application to immunodetection of hybrids

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393563

Induction of RNA-stabilized DMA conformers by transcription of an immunoglobulin switch region

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393563

Competition between the RNA transcript and the nontemplate DNA strand during R-loop formation in vitro: a nick can serve as a strong R-loop initiation site

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393563

Detection and structural analysis of R-loops

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393563

DNA sequences mediating class switching in alpha-immunoglobulins.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393563

Telomeric RNA-DNA hybrids affect telomere-length dynamics and senescence

25 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25890199

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The influence of transcriptional orientation on endogenous switch region function

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25890199

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/S13104-015-1092-1

1 reference

Dimensions Publication ID

9 August 2017

0 references

1 reference

9 August 2017

1 reference