(Q35617193)

9 August 2017

title

Activation-induced disruption of nucleosome position clusters on the coding regions of Gcn4-dependent genes extends into neighbouring genes (English)

1 reference

9 August 2017

Hope A Cole

1

1 reference

9 August 2017

Bruce H Howard

series ordinal

2

1 reference

9 August 2017

David J Clark

series ordinal

3

1 reference

9 August 2017

language of work or name

English

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publication date

31 August 2011

1 reference

9 August 2017

published in

Nucleic Acids Research

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9 August 2017

volume

39

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9 August 2017

issue

22

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9 August 2017

page(s)

9521-9535

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Creative Commons Attribution-NonCommercial 3.0 Unported

9 August 2017

copyright license

start time

7 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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27 July 2018

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Phosphorylated Pol II CTD Recruits Multiple HDACs, Including Rpd3C(S), for Methylation-Dependent Deacetylation of ORF Nucleosomes

27 July 2018

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A RSC/nucleosome complex determines chromatin architecture and facilitates activator binding

27 July 2018

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27 July 2018

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Intrinsic histone-DNA interactions are not the major determinant of nucleosome positions in vivo

27 July 2018

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What controls nucleosome positions?

27 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3239181

The DNA-encoded nucleosome organization of a eukaryotic genome

27 July 2018

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Distinct modes of regulation by chromatin encoded through nucleosome positioning signals

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3239181

Rapid, transcription-independent loss of nucleosomes over a large chromatin domain at Hsp70 loci

27 July 2018

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A barrier nucleosome model for statistical positioning of nucleosomes throughout the yeast genome

27 July 2018

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A high-resolution, nucleosome position map of C. elegans reveals a lack of universal sequence-dictated positioning

27 July 2018

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ACF catalyses chromatosome movements in chromatin fibres

27 July 2018

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A high-resolution atlas of nucleosome occupancy in yeast

27 July 2018

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Activation of Saccharomyces cerevisiae HIS3 results in Gcn4p-dependent, SWI/SNF-dependent mobilization of nucleosomes over the entire gene

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3239181

A genomic code for nucleosome positioning

27 July 2018

1 reference

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Evidence for eviction and rapid deposition of histones upon transcriptional elongation by RNA polymerase II.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3239181

Evidence for distinct mechanisms facilitating transcript elongation through chromatin in vivo

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3239181

SWI/SNF-dependent long-range remodeling of yeast HIS3 chromatin

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3239181

Solvent mediated interactions in the structure of the nucleosome core particle at 1.9 a resolution

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3239181

Specific distribution of the Saccharomyces cerevisiae linker histone homolog HHO1p in the chromatin

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3239181

Remodeling of yeast CUP1 chromatin involves activator-dependent repositioning of nucleosomes over the entire gene and flanking sequences

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3239181

Characterization of the imitation switch subfamily of ATP-dependent chromatin-remodeling factors in Saccharomyces cerevisiae

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3239181

Crystal structure of the nucleosome core particle at 2.8 A resolution

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3239181

Transcription factors vs nucleosomes: regulation of the PHO5 promoter in yeast

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3239181

Nucleosome packaging and nucleosome positioning of genomic DNA

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3239181

Chromatin remodeling during Saccharomyces cerevisiae ADH2 gene activation

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3239181

Sequence periodicities in chicken nucleosome core DNA.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3239181

Statistical positioning of nucleosomes by specific protein-binding to an upstream activating sequence in yeast

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3239181

Location of nucleosomes in simian virus 40 chromatin

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3239181

Involvement of histone H1 in the organization of the nucleosome and of the salt-dependent superstructures of chromatin

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3239181

Quantitative analysis of the digestion of yeast chromatin by staphylococcal nuclease

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3239181

The DNA sequence-dependence of nucleosome positioning in vivo and in vitro

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3239181

Nucleosomes can invade DNA territories occupied by their neighbors

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3239181

A ncRNA modulates histone modification and mRNA induction in the yeast GAL gene cluster

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3239181

Translational and rotational settings of H2A.Z nucleosomes across the Saccharomyces cerevisiae genome.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3239181

Genome-scale identification of nucleosome positions in S. cerevisiae

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3239181

Distinct activities of CHD1 and ACF in ATP-dependent chromatin assembly.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3239181

Evidence for nucleosome depletion at active regulatory regions genome-wide

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3239181

Nucleosome remodeling induced by RNA polymerase II: loss of the H2A/H2B dimer during transcription.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3239181

DNA sequence plays a major role in determining nucleosome positions in yeast CUP1 chromatin.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3239181

Transcriptional profiling shows that Gcn4p is a master regulator of gene expression during amino acid starvation in yeast

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3239181

Nucleosome positioning on the MMTV LTR results from the frequency-biased occupancy of multiple frames

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3239181

Structure of the nucleosome core particle at 7 Å resolution

25 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKR643

Yeast chromatin structure

21 January 2018

1 reference

12 December 2020

Structure of the chromatosome, a chromatin particle containing 160 base pairs of DNA and all the histones

1 reference

12 December 2020

Nuclease digestion of circular TRP1ARS1 chromatin reveals positioned nucleosomes separated by nuclease-sensitive regions

1 reference

12 December 2020

Mechanism of protein access to specific DNA sequences in chromatin: a dynamic equilibrium model for gene regulation

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/GKR643

1 reference

9 August 2017

1 reference

9 August 2017

1 reference