(Q35626576)

9 August 2017

title

Effects of tissue handling on RNA integrity and microarray measurements from resected breast cancers (English)

1 reference

9 August 2017

5

Funda Meric-Bernstam

1 reference

9 August 2017

1

Christos Hatzis

1 reference

9 August 2017

6

Gildy V Babiera

1 reference

9 August 2017

Hongxia Sun

2

1 reference

9 August 2017

Hui Yao

3

1 reference

9 August 2017

Rebekah E Hubbard

4

1 reference

9 August 2017

Yun Wu

7

1 reference

9 August 2017

Lajos Pusztai

8

1 reference

9 August 2017

W Fraser Symmans

9

1 reference

9 August 2017

language of work or name

English

0 references

publication date

27 October 2011

1 reference

Journal of the National Cancer Institute

9 August 2017

published in

1 reference

9 August 2017

volume

103

1 reference

9 August 2017

issue

24

1 reference

9 August 2017

page(s)

1871-1883

1 reference

Influence of hypoxia induced by minimally invasive prostatectomy on gene expression: implications for biomarker analysis

9 August 2017

cites work

1 reference

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27 July 2018

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Impact of biospecimens handling on biomarker research in breast cancer

27 July 2018

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Genomic grade index is associated with response to chemotherapy in patients with breast cancer

27 July 2018

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Gene-expression signatures in breast cancer

27 July 2018

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Supervised risk predictor of breast cancer based on intrinsic subtypes

27 July 2018

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27 July 2018

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Gene-expression assays: new tools to individualize treatment of early-stage breast cancer

27 July 2018

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27 July 2018

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Definition of clinically distinct molecular subtypes in estrogen receptor-positive breast carcinomas through genomic grade

27 July 2018

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The MicroArray Quality Control (MAQC) project shows inter- and intraplatform reproducibility of gene expression measurements

27 July 2018

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Concordance among gene-expression-based predictors for breast cancer

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243675

Influence of surgical manipulation on prostate gene expression: implications for molecular correlates of treatment effects and disease prognosis

27 July 2018

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Gene expression profiling in breast cancer: understanding the molecular basis of histologic grade to improve prognosis

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243675

RNA integrity and the effect on the real-time qRT-PCR performance

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243675

The RIN: an RNA integrity number for assigning integrity values to RNA measurements

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243675

Breast cancer molecular subtypes respond differently to preoperative chemotherapy

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243675

Stability and heterogeneity of expression profiles in lung cancer specimens harvested following surgical resection

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243675

Comparison of frozen and RNALater solid tissue storage methods for use in RNA expression microarrays

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243675

Bioconductor: open software development for computational biology and bioinformatics

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243675

Tissue ischemia time affects gene and protein expression patterns within minutes following surgical tumor excision

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243675

Moderate degradation does not preclude microarray analysis of small amounts of RNA.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243675

Changes in differential gene expression because of warm ischemia time of radical prostatectomy specimens.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243675

Sources of variability and effect of experimental approach on expression profiling data interpretation

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243675

Gene expression patterns of breast carcinomas distinguish tumor subclasses with clinical implications

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243675

Proposals for uniform collection of biospecimens from neoadjuvant breast cancer clinical trials: timing and specimen types.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243675

A genomic predictor of response and survival following taxane-anthracycline chemotherapy for invasive breast cancer.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243675

Genomic index of sensitivity to endocrine therapy for breast cancer.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243675

Defining the clinical utility of gene expression assays in breast cancer: the intersection of science and art in clinical decision making.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243675

Recommendations for collection and handling of specimens from group breast cancer clinical trials

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243675

Evaluation of DNA microarray results with quantitative gene expression platforms

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243675

Technology Insight: tuning into the genetic orchestra using microarrays--limitations of DNA microarrays in clinical practice

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243675

Noise and bias in microarray analysis of tumor specimens

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243675

Biobanking of fresh frozen tissue: RNA is stable in nonfixed surgical specimens.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243675

A multigene assay to predict recurrence of tamoxifen-treated, node-negative breast cancer

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243675

Expression profiling--best practices for data generation and interpretation in clinical trials

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3243675

Effects of Ischemia on Gene Expression

25 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FJNCI%2FDJR438

Mixed-Effects Models in Sand S-PLUS

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FJNCI%2FDJR438

Analysis of the molecular quality of human tissues: an experience from the Cooperative Human Tissue Network

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22034635

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/JNCI/DJR438

1 reference

9 August 2017

1 reference

9 August 2017

1 reference