(Q35634499)

English

Pathway confirmation and flux analysis of central metabolic pathways in Desulfovibrio vulgaris hildenborough using gas chromatography-mass spectrometry and Fourier transform-ion cyclotron resonance mass spectrometry

scientific article published on 17 November 2006

In more languages

Statements

scholarly article

1 reference

Europe PubMed Central

9 August 2017

Pathway confirmation and flux analysis of central metabolic pathways in Desulfovibrio vulgaris hildenborough using gas chromatography-mass spectrometry and Fourier transform-ion cyclotron resonance mass spectrometry (English)

1 reference

Europe PubMed Central

9 August 2017

mass spectrometry

0 references

Desulfovibrio vulgaris

object named as

Desulfovibrio vulgaris

1 reference

based on heuristic

inferred from title

object named as

Terry C Hazen

5

0 references

Aindrila Mukhopadhyay

3

object named as

Aindrila Mukhopadhyay

1 reference

Europe PubMed Central

9 August 2017

6

object named as

Jay D Keasling

1 reference

Europe PubMed Central

9 August 2017

1

object named as

Yinjie Tang

1 reference

Europe PubMed Central

9 August 2017

author name string

Francesco Pingitore

2

1 reference

Europe PubMed Central

9 August 2017

Richard Phan

4

1 reference

Europe PubMed Central

9 August 2017

language of work or name

0 references

publication date

17 November 2006

1 reference

Europe PubMed Central

9 August 2017

Journal of Bacteriology

1 reference

Europe PubMed Central

9 August 2017

189

1 reference

Europe PubMed Central

9 August 2017

3

1 reference

Europe PubMed Central

9 August 2017

940-949

1 reference

Europe PubMed Central

9 August 2017

describes a project that uses

gas chromatography-mass spectrometry

1 reference

based on heuristic

inferred from title

Energetic consequences of nitrite stress in Desulfovibrio vulgaris Hildenborough, inferred from global transcriptional analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1797301

12 July 2018

Salt stress in Desulfovibrio vulgaris Hildenborough: an integrated genomics approach

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1797301

12 July 2018

Global analysis of heat shock response in Desulfovibrio vulgaris Hildenborough

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1797301

12 July 2018

Metabolic Pathways Leading to Mercury Methylation in Desulfovibrio desulfuricans LS.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1797301

12 July 2018

Energetics of Growth of a Defined Mixed Culture of Desulfovibrio vulgaris and Methanosarcina barkeri: Interspecies Hydrogen Transfer in Batch and Continuous Cultures.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1797301

12 July 2018

Characterization of citrate synthase from Geobacter sulfurreducens and evidence for a family of citrate synthases similar to those of eukaryotes throughout the Geobacteraceae.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1797301

12 July 2018

The MicrobesOnline Web site for comparative genomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1797301

12 July 2018

Continuous removal of Cr(VI) from aqueous solution catalysed by palladised biomass of Desulfovibrio vulgaris

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1797301

12 July 2018

Metabolomics applications of FT-ICR mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1797301

12 July 2018

Robustness of cellular functions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1797301

12 July 2018

The genome sequence of the anaerobic, sulfate-reducing bacterium Desulfovibrio vulgaris Hildenborough

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1797301

12 July 2018

New tools for mass isotopomer data evaluation in (13)C flux analysis: mass isotope correction, data consistency checking, and precursor relationships.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1797301

12 July 2018

Collisional activation of peptide ions in FT-ICR mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1797301

12 July 2018

Metabolic flux profiling of Escherichia coli mutants in central carbon metabolism using GC-MS.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1797301

12 July 2018

Carbon monoxide cycling by Desulfovibrio vulgaris Hildenborough

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1797301

12 July 2018

Methanogenesis from furfural by defined mixed cultures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1797301

12 July 2018

Isolation and characterization of strains CVO and FWKO B, two novel nitrate-reducing, sulfide-oxidizing bacteria isolated from oil field brine

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1797301

12 July 2018

Metabolic flux ratio analysis of genetic and environmental modulations of Escherichia coli central carbon metabolism.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1797301

12 July 2018

Mass isotopomer distribution analysis at eight years: theoretical, analytic, and experimental considerations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1797301

12 July 2018

Fourier transform ion cyclotron resonance mass spectrometry: a primer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1797301

12 July 2018

Characterization of 16S rRNA genes from oil field microbial communities indicates the presence of a variety of sulfate-reducing, fermentative, and sulfide-oxidizing bacteria.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1797301

12 July 2018

Microcalorimetric studies of the growth of sulfate-reducing bacteria: energetics of Desulfovibrio vulgaris growth

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1797301

12 July 2018

Role of ferredoxin in the synthesis of alpha-ketobutyrate from propionyl coenzyme A and carbon dioxide by enzymes from photosynthetic and nonphotosynthetic bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1797301

12 July 2018

Citric-acid cycle, 50 years on. Modifications and an alternative pathway in anaerobic bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1797301

12 July 2018

The tricarboxylic acid pathway in Desulfovibrio

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1797301

12 July 2018

Modeling isotopomer distributions in biochemical networks using isotopomer mapping matrices

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1797301

25 September 2018

Bidirectional reaction steps in metabolic networks: I. Modeling and simulation of carbon isotope labeling experiments.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1797301

25 September 2018

Large-scale in vivo flux analysis shows rigidity and suboptimal performance of Bacillus subtilis metabolism

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1797301

25 September 2018

An improved method for statistical analysis of metabolic flux analysis using isotopomer mapping matrices with analytical expressions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1797301

25 September 2018

Metabolic flux analysis of Escherichia coli K12 grown on 13C-labeled acetate and glucose using GC-MS and powerful flux calculation method

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1797301

25 September 2018

Mechanistic study of microbial control of hydrogen sulfide production in oil reservoirs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1797301

25 September 2018

Quantitative analysis of metabolic fluxes in Escherichia coli, using two-dimensional NMR spectroscopy and complete isotopomer models.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1797301

25 September 2018

A unified model describing the role of hydrogen in the growth ofDesulfovibrio vulgaris under different environmental conditions

1 reference

https://pubmed.ncbi.nlm.nih.gov/17114264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Physiologic studies with the sulfate-reducing bacterium Desulfovibrio desulfuricans: evaluation for use in a biofuel cell

1 reference

https://pubmed.ncbi.nlm.nih.gov/17114264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sulfate reduction processes in sediments at different sites in Lake Kinneret, Israel

1 reference

https://pubmed.ncbi.nlm.nih.gov/17114264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Glutamate biosynthesis in anaerobic bacteria. II. Stereospecificity of aconitase and citrate synthetase of Clostridium kluyveri

1 reference

https://pubmed.ncbi.nlm.nih.gov/17114264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The stereospecificity of the citrate synthase in sulfate-reducing and photosynthetic bacteria

1 reference

https://pubmed.ncbi.nlm.nih.gov/17114264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Presence and Stereospecificity of Citrate Synthase in Anaerobic Bacteria*

1 reference

https://pubmed.ncbi.nlm.nih.gov/17114264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

From genome to cellular phenotype--a role for metabolic flux analysis?

1 reference

https://pubmed.ncbi.nlm.nih.gov/17114264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Environmental factors affecting mercury methylation in estuarine sediments

1 reference

https://pubmed.ncbi.nlm.nih.gov/17114264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

13C-NMR, MS and metabolic flux balancing in biotechnology research

1 reference

https://pubmed.ncbi.nlm.nih.gov/17114264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/JB.00948-06

1 reference

Europe PubMed Central

9 August 2017

1 reference

Europe PubMed Central

9 August 2017

1 reference

Europe PubMed Central

9 August 2017

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q35634499&oldid=1878253703"