(Q35644673)

9 August 2017

title

Mechanism of translocation of uracil-DNA glycosylase from Escherichia coli between distributed lesions (English)

1 reference

9 August 2017

1 reference

Grigory V Mechetin

1

1 reference

9 August 2017

Dmitry O Zharkov

series ordinal

2

1 reference

9 August 2017

language of work or name

English

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publication date

28 September 2011

1 reference

Biochemical and Biophysical Research Communications

9 August 2017

published in

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9 August 2017

volume

414

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9 August 2017

issue

2

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9 August 2017

page(s)

425-430

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Dancing on DNA: kinetic aspects of search processes on DNA

9 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3249333

Hopping enables a DNA repair glycosylase to search both strands and bypass a bound protein.

27 July 2018

1 reference

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Diffusion of the restriction nuclease EcoRI along DNA.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3249333

Human alkyladenine DNA glycosylase employs a processive search for DNA damage

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3249333

Uracil DNA glycosylase uses DNA hopping and short-range sliding to trap extrahelical uracils

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3249333

Ionic strength and magnesium affect the specificity of Escherichia coli and human 8-oxoguanine-DNA glycosylases

27 July 2018

1 reference

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Enzymatic capture of an extrahelical thymine in the search for uracil in DNA

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3249333

The intricate structural chemistry of base excision repair machinery: implications for DNA damage recognition, removal, and repair.

27 July 2018

1 reference

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DNA base damage recognition and removal: new twists and grooves

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3249333

The DNA trackwalkers: principles of lesion search and recognition by DNA glycosylases

27 July 2018

1 reference

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Investigations of pyrimidine dimer glycosylases--a paradigm for DNA base excision repair enzymology

27 July 2018

1 reference

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Analysis of a one-dimensional random walk with irreversible losses at each step: applications for protein movement on DNA

27 July 2018

1 reference

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Cations as hydrogen bond donors: a view of electrostatic interactions in DNA.

27 July 2018

1 reference

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Direct visualization of dynamic protein-DNA interactions with a dedicated atomic force microscope

27 July 2018

1 reference

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Processivity of Escherichia coli and rat liver mitochondrial uracil-DNA glycosylase is affected by NaCl concentration

27 July 2018

1 reference

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Processivity of uracil DNA glycosylase

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3249333

Diffusion-driven mechanisms of protein translocation on nucleic acids. 3. The Escherichia coli lac repressor--operator interaction: kinetic measurements and conclusions.

27 July 2018

1 reference

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The lac repressor-operator interaction. 3. Kinetic studies

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3249333

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3249333

Predicting stability of DNA duplexes in solutions containing magnesium and monovalent cations

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3249333

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3249333

A base-excision DNA-repair protein finds intrahelical lesion bases by fast sliding in contact with DNA.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3249333

Escherichia coli MutY and Fpg utilize a processive mechanism for target location

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3249333

Diffusion-driven mechanisms of protein translocation on nucleic acids. 1. Models and theory.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3249333

Human apurinic/apyrimidinic endonuclease is processive

25 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21971549

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Diffusion-driven mechanisms of protein translocation on nucleic acids. 2. The Escherichia coli lac repressor-operator interaction: equilibrium measurements

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21971549

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.BBRC.2011.09.106

1 reference

9 August 2017

1 reference

9 August 2017

1 reference