(Q35701210)

9 August 2017

title

Increased efficiency in identifying mixed pollen samples by meta-barcoding with a dual-indexing approach (English)

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9 August 2017

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2

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9 August 2017

Ingolf Steffan-Dewenter

7

Ingolf Steffan-Dewenter

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9 August 2017

Alexander Keller

8

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Andrea Holzschuh

Andrea Holzschuh

4

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Wiebke Sickel

Wiebke Sickel

1

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Gudrun Grimmer

3

Gudrun Grimmer

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9 August 2017

5

Stephan Härtel

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9 August 2017

Jonathan Lanzen

6

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9 August 2017

publication date

22 July 2015

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9 August 2017

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9 August 2017

volume

15

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9 August 2017

page(s)

20

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describes a project that uses

9 August 2017

phyloseq

phyloseq

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CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

Application of ITS2 metabarcoding to determine the provenance of pollen collected by honey bees in an agroecosystem.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509727

A DNA barcoding approach to characterize pollen collected by honeybees

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509727

Evaluating multiplexed next-generation sequencing as a method in palynology for mixed pollen samples

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509727

Efficient and sensitive identification and quantification of airborne pollen using next-generation DNA sequencing.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509727

UPARSE: highly accurate OTU sequences from microbial amplicon reads

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509727

phyloseq: an R package for reproducible interactive analysis and graphics of microbiome census data

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509727

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509727

Multiple routes of pesticide exposure for honey bees living near agricultural fields

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509727

New perspectives in diet analysis based on DNA barcoding and parallel pyrosequencing: the trnL approach

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509727

Database resources of the National Center for Biotechnology Information

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509727

Pollen foraging behaviour of solitary Hawaiian bees revealed through molecular pollen analysis

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509727

Analysing diet of small herbivores: the efficiency of DNA barcoding coupled with high-throughput pyrosequencing for deciphering the composition of complex plant mixtures

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509727

5.8S-28S rRNA interaction and HMM-based ITS2 annotation

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509727

The influence of sex, handedness, and washing on the diversity of hand surface bacteria

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509727

Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509727

Food forensics: using DNA technology to combat misdescription and fraud

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509727

Basic local alignment search tool

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509727

A DNA barcoding approach to identify plant species in multiflower honey

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509727

Development of a dual-index sequencing strategy and curation pipeline for analyzing amplicon sequence data on the MiSeq Illumina sequencing platform.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509727

Search and clustering orders of magnitude faster than BLAST

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509727

QIIME allows analysis of high-throughput community sequencing data

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509727

Validation of the ITS2 region as a novel DNA barcode for identifying medicinal plant species

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509727

The ITS2 Database III--sequences and structures for phylogeny

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509727

Resource distributions among habitats determine solitary bee offspring production in a mosaic landscape

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509727

Ancient DNA from pollen: a genetic record of population history in Scots pine

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509727

Ancient plant DNA: review and prospects.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4509727

DNA Barcoding for Honey Biodiversity

25 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2FS12898-015-0051-Y

Late Quaternary Araucaria forest, grassland (Campos), fire and climate dynamics, studied by high-resolution pollen, charcoal and multivariate analysis of the Cambará do Sul core in southern Brazil

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2FS12898-015-0051-Y

10.1186/S12898-015-0051-Y

21 January 2018

Identifiers

DOI

1 reference

Dimensions Publication ID

9 August 2017

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9 August 2017

1 reference