(Q35740248)

10 August 2017

title

Reconstructing folding energy landscapes from splitting probability analysis of single-molecule trajectories (English)

1 reference

10 August 2017

1 reference

Ajay P Manuel

1

1 reference

10 August 2017

John Lambert

series ordinal

2

1 reference

10 August 2017

Michael T Woodside

series ordinal

3

1 reference

10 August 2017

language of work or name

English

0 references

publication date

26 May 2015

1 reference

Proceedings of the National Academy of Sciences of the United States of America

10 August 2017

published in

1 reference

10 August 2017

volume

112

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10 August 2017

issue

23

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10 August 2017

page(s)

7183-7188

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Communication: Does force spectroscopy of biomolecules probe their intrinsic dynamic properties?

10 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4466695

Determining intrachain diffusion coefficients for biopolymer dynamics from single-molecule force spectroscopy measurements.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4466695

Reconstructing folding energy landscapes by single-molecule force spectroscopy

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4466695

From mechanical folding trajectories to intrinsic energy landscapes of biopolymers.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4466695

The protein-folding problem, 50 years on.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4466695

Quantifying internal friction in unfolded and intrinsically disordered proteins with single-molecule spectroscopy.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4466695

Measuring the folding landscape of a harmonically constrained biopolymer

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4466695

Free energy profiles from single-molecule pulling experiments

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4466695

Full distance-resolved folding energy landscape of one single protein molecule

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4466695

Coordinate-dependent diffusion in protein folding

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4466695

Chemical, physical, and theoretical kinetics of an ultrafast folding protein

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4466695

Theory, analysis, and interpretation of single-molecule force spectroscopy experiments

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4466695

Folding and unfolding single RNA molecules under tension

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4466695

Ultrafast dynamics of protein collapse from single-molecule photon statistics.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4466695

Direct measurement of the full, sequence-dependent folding landscape of a nucleic acid

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4466695

Nanomechanical measurements of the sequence-dependent folding landscapes of single nucleic acid hairpins

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4466695

Reaction coordinates and rates from transition paths

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4466695

Free energy reconstruction from nonequilibrium single-molecule pulling experiments

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4466695

Spin glasses and the statistical mechanics of protein folding

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4466695

Models for the Specific Adhesion of Cells to Cells

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4466695

Force-clamp experiments reveal the free-energy profile and diffusion coefficient of the collapse of protein molecules.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4466695

Effect of handle length and microsphere size on transition kinetics in single-molecule experiments

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4466695

Signal-pair correlation analysis of single-molecule trajectories.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4466695

Splitting probabilities as a test of reaction coordinate choice in single-molecule experiments.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4466695

One-dimensional reaction coordinate and the corresponding potential of mean force from commitment probability distribution

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4466695

Passive all-optical force clamp for high-resolution laser trapping.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4466695

On the transition coordinate for protein folding

25 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.1419490112

Reaction-rate theory: fifty years after Kramers

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.1419490112

Transition-Path Probability as a Test of Reaction-Coordinate Quality Reveals DNA Hairpin Folding Is a One-Dimensional Diffusive Process

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4466695

Compaction and tensile forces determine the accuracy of folding landscape parameters from single molecule pulling experiments

25 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.1419490112

Force-dependent fragility in RNA hairpins

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26039984

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Transition path times for nucleic Acid folding determined from energy-landscape analysis of single-molecule trajectories

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26039984

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Locating the Barrier for Folding of Single Molecules under an External Force

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26039984

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.1419490112

1 reference

10 August 2017

0 references

1 reference

10 August 2017

1 reference