(Q35741123)

10 August 2017

title

Hydrophobic association of alpha-helices, steric dewetting, and enthalpic barriers to protein folding (English)

1 reference

10 August 2017

0 references

1 reference

Justin L MacCallum

1

1 reference

10 August 2017

Maria Sabaye Moghaddam

series ordinal

2

1 reference

10 August 2017

Hue Sun Chan

series ordinal

3

1 reference

10 August 2017

D Peter Tieleman

series ordinal

4

1 reference

10 August 2017

language of work or name

English

0 references

publication date

2 April 2007

1 reference

Proceedings of the National Academy of Sciences of the United States of America

10 August 2017

published in

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10 August 2017

volume

104

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10 August 2017

issue

15

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10 August 2017

page(s)

6206-6210

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Enthalpy-entropy contributions to the potential of mean force of nanoscopic hydrophobic solutes.

10 August 2017

cites work

1 reference

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Role of topology, nonadditivity, and water-mediated interactions in predicting the structures of alpha/beta proteins.

12 July 2018

1 reference

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Interfaces and the driving force of hydrophobic assembly

12 July 2018

1 reference

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Hydrophobic hydration from small to large lengthscales: Understanding and manipulating the crossover.

12 July 2018

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A biomolecular force field based on the free enthalpy of hydration and solvation: the GROMOS force-field parameter sets 53A5 and 53A6

12 July 2018

1 reference

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Simulations of the role of water in the protein-folding mechanism

12 July 2018

1 reference

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Microsecond folding dynamics of the F13W G29A mutant of the B domain of staphylococcal protein A by laser-induced temperature jump

12 July 2018

1 reference

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Folding a protein in a computer: An atomic description of the folding/unfolding of protein A

12 July 2018

1 reference

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Is there a unifying mechanism for protein folding?

12 July 2018

1 reference

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Protein Structure and the Energetics of Protein Stability.

12 July 2018

1 reference

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Protein folding mediated by solvation: water expulsion and formation of the hydrophobic core occur after the structural collapse

12 July 2018

1 reference

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Quantification of the hydrophobic interaction by simulations of the aggregation of small hydrophobic solutes in water

12 July 2018

1 reference

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Barriers in protein folding reactions

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847460

Contact order, transition state placement and the refolding rates of single domain proteins.

12 July 2018

1 reference

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Protein folding kinetics exhibit an Arrhenius temperature dependence when corrected for the temperature dependence of protein stability

12 July 2018

1 reference

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From Levinthal to pathways to funnels

12 July 2018

1 reference

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Thermodynamic properties of an extremely rapid protein folding reaction

12 July 2018

1 reference

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VMD: visual molecular dynamics

12 July 2018

1 reference

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Energetics of protein structure.

12 July 2018

1 reference

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Funnels, pathways, and the energy landscape of protein folding: a synthesis

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847460

Negative activation enthalpies in the kinetics of protein folding

12 July 2018

1 reference

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The interpretation of protein structures: Estimation of static accessibility

12 July 2018

1 reference

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Protein folding funnels: a kinetic approach to the sequence-structure relationship

12 July 2018

1 reference

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Areas, volumes, packing and protein structure

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847460

Fluctuating hydration structure around nanometer-size hydrophobic solutes. I. Caging and drying around C60 and C60H60 spheres.

12 July 2018

1 reference

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Observation of a dewetting transition in the collapse of the melittin tetramer

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1847460

Desolvation is a likely origin of robust enthalpic barriers to protein folding.

25 September 2018

1 reference

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Temperature dependence of three-body hydrophobic interactions: potential of mean force, enthalpy, entropy, heat capacity, and nonadditivity.

25 September 2018

1 reference

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Computer modeling of polyleucine-based coiled coil dimers in a realistic membrane environment: insight into helix-helix interactions in membrane proteins

25 September 2018

1 reference

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Cooperativity principles in protein folding.

25 September 2018

1 reference

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Configuration-dependent heat capacity of pairwise hydrophobic interactions.

25 September 2018

1 reference

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Protein folding. Matching speed and locality.

25 September 2018

1 reference

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The Mechanism of Hydrophobic Solvation Depends on Solute Radius

25 September 2018

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GROMACS 3.0: a package for molecular simulation and trajectory analysis

21 January 2018

1 reference

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Comparison of simple potential functions for simulating liquid water

21 January 2018

1 reference

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Particle mesh Ewald: An N⋅log(N) method for Ewald sums in large systems

21 January 2018

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THE weighted histogram analysis method for free-energy calculations on biomolecules. I. The method

21 January 2018

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Surface topography dependence of biomolecular hydrophobic hydration

21 January 2018

1 reference

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Hydrophobic collapse in multidomain protein folding

21 January 2018

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12 December 2020

A microscopic basis for the global appearance of energy landscapes

1 reference

12 December 2020

Calculations on folding of segment B1 of streptococcal protein G

1 reference

12 December 2020

Characterization of the transition state of lysozyme unfolding. I. Effect of protein-solvent interactions on the transition state

1 reference

12 December 2020

Application of scaled particle theory to model the hydrophobic effect: implications for molecular association and protein stability

1 reference

12 December 2020

On the mechanism of hydrophobic association of nanoscopic solutes

1 reference

12 December 2020

Trifluoroethanol promotes helix formation by destabilizing backbone exposure: desolvation rather than native hydrogen bonding defines the kinetic pathway of dimeric coiled coil folding

1 reference

12 December 2020

Temperature dependence of the hydrophobic hydration and interaction of simple solutes: an examination of five popular water models

1 reference

12 December 2020

Protein-folding dynamics

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.0605859104

1 reference

10 August 2017

0 references

1 reference

10 August 2017

1 reference