(Q35747495)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26279299%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

title

Onco-exaptation of an endogenous retroviral LTR drives IRF5 expression in Hodgkin lymphoma (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26279299%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26279299%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

Mohammad M Karimi

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26279299%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

author name string

M T Romanish

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26279299%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

L Gagnier

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26279299%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

L Y Kuo

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26279299%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

C Steidl

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26279299%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

D L Mager

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26279299%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

language of work or name

English

0 references

publication date

17 August 2015

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26279299%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26279299%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

volume

35

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26279299%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

issue

19

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26279299%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

page(s)

2542-2546

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26279299%20AND%20SRC:MED&resulttype=core&format=json

Initial sequencing and analysis of the human genome

22 February 2020

cites work

1 reference

https://api.crossref.org/works/10.1038%2FONC.2015.308

Transposable elements: an abundant and natural source of regulatory sequences for host genes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FONC.2015.308

C-GATE - catalogue of genes affected by transposable elements

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FONC.2015.308

Transposable elements reveal a stem cell-specific class of long noncoding RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FONC.2015.308

Transposable elements are major contributors to the origin, diversification, and regulation of vertebrate long noncoding RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FONC.2015.308

DNA hypomethylation within specific transposable element families associates with tissue-specific enhancer landscape

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FONC.2015.308

Transposable elements and the epigenetic regulation of the genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FONC.2015.308

DNA hypomethylation in cancer: epigenetic scars of a neoplastic journey

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FONC.2015.308

Derepression of an endogenous long terminal repeat activates the CSF1R proto-oncogene in human lymphoma.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FONC.2015.308

Recent insights into the biology of Hodgkin lymphoma: unraveling the mysteries of the Reed-Sternberg cell

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FONC.2015.308

Gene expression profiling of microdissected Hodgkin Reed-Sternberg cells correlates with treatment outcome in classical Hodgkin lymphoma

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FONC.2015.308

Distinct isoform of FABP7 revealed by screening for retroelement-activated genes in diffuse large B-cell lymphoma.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FONC.2015.308

DNA methylation and SETDB1/H3K9me3 regulate predominantly distinct sets of genes, retroelements, and chimeric transcripts in mESCs

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FONC.2015.308

IRF5-mediated signaling and implications for SLE.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FONC.2015.308

Mapping of transcription factor motifs in active chromatin identifies IRF5 as key regulator in classical Hodgkin lymphoma

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FONC.2015.308

The mutational landscape of Hodgkin lymphoma cell lines determined by whole-exome sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FONC.2015.308

Frequent mutation of histone-modifying genes in non-Hodgkin lymphoma

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FONC.2015.308

Repbase Update, a database of eukaryotic repetitive elements

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FONC.2015.308

Two discrete promoters regulate the alternatively spliced human interferon regulatory factor-5 isoforms. Multiple isoforms with distinct cell type-specific expression, localization, regulation, and function

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FONC.2015.308

EMBOSS: the European Molecular Biology Open Software Suite

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FONC.2015.308

The regulated retrotransposon transcriptome of mammalian cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FONC.2015.308

VlincRNAs controlled by retroviral elements are a hallmark of pluripotency and cancer.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FONC.2015.308

Hypomethylation of long interspersed nuclear element-1 (LINE-1) leads to activation of proto-oncogenes in human colorectal cancer metastasis

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FONC.2015.308

Hypomethylation of a LINE-1 promoter activates an alternate transcript of the MET oncogene in bladders with cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FONC.2015.308

Demethylation of a LINE-1 antisense promoter in the cMet locus impairs Met signalling through induction of illegitimate transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FONC.2015.308

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FONC.2015.308

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FONC.2015.308

Retrotransposon-induced heterochromatin spreading in the mouse revealed by insertional polymorphisms

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FONC.2015.308

Fast gapped-read alignment with Bowtie 2

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FONC.2015.308

A novel protein isoform of the multicopy human NAIP gene derives from intragenic Alu SINE promoters

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FONC.2015.308

NIH Image to ImageJ: 25 years of image analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FONC.2015.308

Identifying a high fraction of the human genome to be under selective constraint using GERP++.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FONC.2015.308

Retroviral DNA integration

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FONC.2015.308

Scoring pairwise genomic sequence alignments

31 March 2020

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26279299

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Four Promoters of IRF5 Respond Distinctly to Stimuli and are Affected by Autoimmune-Risk Polymorphisms

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26279299

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/ONC.2015.308

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26279299%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

1 reference