(Q35749760)

10 August 2017

title

Molgenis-impute: imputation pipeline in a box (English)

1 reference

10 August 2017

1 reference

6

Morris A Swertz

1 reference

10 August 2017

author name string

Alexandros Kanterakis

1

1 reference

10 August 2017

Patrick Deelen

2

1 reference

10 August 2017

Freerk van Dijk

3

1 reference

10 August 2017

Heorhiy Byelas

4

1 reference

10 August 2017

Martijn Dijkstra

5

1 reference

10 August 2017

publication date

19 August 2015

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10 August 2017

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10 August 2017

volume

8

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10 August 2017

page(s)

359

1 reference

Genotype harmonizer: automatic strand alignment and format conversion for genotype data integration

10 August 2017

cites work

1 reference

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Whole-genome sequence variation, population structure and demographic history of the Dutch population

27 July 2018

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A general approach for haplotype phasing across the full spectrum of relatedness

27 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4541731

Best practices for scientific computing

27 July 2018

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The Genome of the Netherlands: design, and project goals

27 July 2018

1 reference

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The Taverna workflow suite: designing and executing workflows of Web Services on the desktop, web or in the cloud

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4541731

Assessment of genotype imputation performance using 1000 Genomes in African American studies

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4541731

Iron metabolism is associated with adipocyte insulin resistance and plasma adiponectin: the Cohort on Diabetes and Atherosclerosis Maastricht (CODAM) study

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4541731

Fast and accurate genotype imputation in genome-wide association studies through pre-phasing

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4541731

Characterizing linkage disequilibrium and evaluating imputation power of human genomic insertion-deletion polymorphisms

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4541731

The effect of reference panels and software tools on genotype imputation

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4541731

How to deal with the early GWAS data when imputing and combining different arrays is necessary

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4541731

A rare variant in MYH6 is associated with high risk of sick sinus syndrome

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4541731

Imputation of sequence variants for identification of genetic risks for Parkinson's disease: a meta-analysis of genome-wide association studies

27 July 2018

1 reference

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Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences

27 July 2018

1 reference

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Excess of rare variants in genes identified by genome-wide association study of hypertriglyceridemia

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4541731

Cloud computing and the DNA data race

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4541731

Cloud computing for comparative genomics

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4541731

Ergatis: a web interface and scalable software system for bioinformatics workflows

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4541731

GRIMP: a web- and grid-based tool for high-speed analysis of large-scale genome-wide association using imputed data

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4541731

A flexible and accurate genotype imputation method for the next generation of genome-wide association studies

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4541731

Accuracy of genome-wide imputation of untyped markers and impacts on statistical power for association studies

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4541731

A unified approach to genotype imputation and haplotype-phase inference for large data sets of trios and unrelated individuals

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4541731

Analyses and comparison of accuracy of different genotype imputation methods

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4541731

PLINK: a tool set for whole-genome association and population-based linkage analyses

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4541731

A new multipoint method for genome-wide association studies by imputation of genotypes

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4541731

myGrid: personalised bioinformatics on the information grid

27 July 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4541731

27 July 2018

https://api.crossref.org/works/10.1186%2FS13104-015-1309-3

Netherlands Twin Register: a focus on longitudinal research

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4541731

Improved imputation quality of low-frequency and rare variants in European samples using the 'Genome of The Netherlands'.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4541731

The Rotterdam Study: 2014 objectives and design update

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4541731

The metabochip, a custom genotyping array for genetic studies of metabolic, cardiovascular, and anthropometric traits

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4541731

Genotype imputation for genome-wide association studies

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4541731

Universal risk factors for multifactorial diseases: LifeLines: a three-generation population-based study

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4541731

Evidence of genetic enrichment for exceptional survival using a family approach: the Leiden Longevity Study.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4541731

Smoking, Alcohol Consumption, and the Risk of Amyotrophic Lateral Sclerosis: A Population-based Study

25 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26286716

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/S13104-015-1309-3

1 reference

Dimensions Publication ID

10 August 2017

0 references

1 reference

10 August 2017

1 reference