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English
Global analysis of exon creation versus loss and the role of alternative splicing in 17 vertebrate genomes
scientific article published on 16 March 2007
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instance of
scholarly article
1 reference
stated in
Europe PubMed Central
PMC publication ID
1852814
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17369312%20AND%20SRC:MED&resulttype=core&format=json
retrieved
27 December 2019
title
Global analysis of exon creation versus loss and the role of alternative splicing in 17 vertebrate genomes
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
1852814
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17369312%20AND%20SRC:MED&resulttype=core&format=json
retrieved
27 December 2019
main subject
alternative mRNA splicing, via spliceosome
1 reference
based on heuristic
inferred from title
author
Alexander V Alekseyenko
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
1852814
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17369312%20AND%20SRC:MED&resulttype=core&format=json
retrieved
27 December 2019
Namshin Kim
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMC publication ID
1852814
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17369312%20AND%20SRC:MED&resulttype=core&format=json
retrieved
27 December 2019
author name string
Christopher J Lee
series ordinal
3
1 reference
stated in
Europe PubMed Central
PMC publication ID
1852814
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17369312%20AND%20SRC:MED&resulttype=core&format=json
retrieved
27 December 2019
language of work or name
English
0 references
publication date
16 March 2007
1 reference
stated in
Europe PubMed Central
PMC publication ID
1852814
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17369312%20AND%20SRC:MED&resulttype=core&format=json
retrieved
27 December 2019
published in
RNA
1 reference
stated in
Europe PubMed Central
PMC publication ID
1852814
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17369312%20AND%20SRC:MED&resulttype=core&format=json
retrieved
27 December 2019
volume
13
1 reference
stated in
Europe PubMed Central
PMC publication ID
1852814
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17369312%20AND%20SRC:MED&resulttype=core&format=json
retrieved
27 December 2019
issue
5
1 reference
stated in
Europe PubMed Central
PMC publication ID
1852814
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17369312%20AND%20SRC:MED&resulttype=core&format=json
retrieved
27 December 2019
page(s)
661-670
1 reference
stated in
Europe PubMed Central
PMC publication ID
1852814
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17369312%20AND%20SRC:MED&resulttype=core&format=json
retrieved
27 December 2019
cites work
Comparison of multiple vertebrate genomes reveals the birth and evolution of human exons
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852814
retrieved
2 October 2017
GeneAlign: a coding exon prediction tool based on phylogenetical comparisons
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852814
retrieved
2 October 2017
Alternative splicing and RNA selection pressure--evolutionary consequences for eukaryotic genomes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852814
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2 October 2017
Incorporating biological information as a prior in an empirical bayes approach to analyzing microarray data
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852814
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2 October 2017
The UCSC Genome Browser Database: update 2006
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852814
retrieved
2 October 2017
Protein modularity of alternatively spliced exons is associated with tissue-specific regulation of alternative splicing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852814
retrieved
2 October 2017
Origin and evolution of new exons in rodents
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852814
retrieved
2 October 2017
Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852814
retrieved
2 October 2017
Revealing global regulatory features of mammalian alternative splicing using a quantitative microarray platform
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852814
retrieved
2 October 2017
eShadow: a tool for comparing closely related sequences
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852814
retrieved
2 October 2017
Minimal conditions for exonization of intronic sequences: 5' splice site formation in alu exons
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852814
retrieved
2 October 2017
Aligning multiple genomic sequences with the threaded blockset aligner
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852814
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2 October 2017
Benchmarking tools for the alignment of functional noncoding DNA
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852814
retrieved
2 October 2017
The birth of an alternatively spliced exon: 3' splice-site selection in Alu exons
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852814
retrieved
2 October 2017
Low conservation of alternative splicing patterns in the human and mouse genomes.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852814
retrieved
2 October 2017
Evolution of alternative splicing: deletions, insertions and origin of functional parts of proteins from intron sequences
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852814
retrieved
2 October 2017
Alu-containing exons are alternatively spliced
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852814
retrieved
2 October 2017
Multiple sequence alignment using partial order graphs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852814
retrieved
2 October 2017
Genome-wide detection of alternative splicing in expressed sequences of human genes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852814
retrieved
2 October 2017
Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852814
retrieved
25 September 2018
Alternative splicing in the human, mouse and rat genomes is associated with an increased frequency of exon creation and/or loss
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852814
retrieved
25 September 2018
Genomics. Vertebrate genomes compared.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852814
retrieved
25 September 2018
Origin of alternative splicing by tandem exon duplication
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852814
retrieved
25 September 2018
Identifiers
DOI
10.1261/RNA.325107
1 reference
stated in
Europe PubMed Central
PMC publication ID
1852814
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17369312%20AND%20SRC:MED&resulttype=core&format=json
retrieved
27 December 2019
PMC publication ID
1852814
1 reference
stated in
Europe PubMed Central
PMC publication ID
1852814
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17369312%20AND%20SRC:MED&resulttype=core&format=json
retrieved
27 December 2019
PubMed publication ID
17369312
1 reference
stated in
Europe PubMed Central
PMC publication ID
1852814
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17369312%20AND%20SRC:MED&resulttype=core&format=json
retrieved
27 December 2019
ResearchGate publication ID
6438760
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