(Q35779118)

10 August 2017

Genomic epidemiology of the Escherichia coli O104:H4 outbreaks in Europe, 2011. (English)

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10 August 2017

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Eric S Lander

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2

Marc Lipsitch

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Anna Montmayeur

Anna Montmayeur

22

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Jakob Frimodt-Møller

Jakob Frimodt-Møller

24

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Andreas Munk Petersen

Andreas M Petersen

25

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François-Xavier Weill

François-Xavier Weill

29

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Karen A. Krogfelt

Karen A Krogfelt

27

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Chad Nusbaum

31

Chad Nusbaum

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10 August 2017

34

William P Hanage

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33

Deborah T Hung

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10 August 2017

28

Edouard Bingen

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10 August 2017

Yonatan H Grad

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10 August 2017

Michael Feldgarden

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10 August 2017

Harindra M Arachchi

4

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10 August 2017

Gustavo C Cerqueira

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10 August 2017

Michael Fitzgerald

6

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10 August 2017

Paul Godfrey

7

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10 August 2017

Brian J Haas

8

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10 August 2017

Cheryl I Murphy

9

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10 August 2017

Carsten Russ

10

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Sean Sykes

11

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10 August 2017

Bruce J Walker

12

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Sarah Young

14

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10 August 2017

Qiandong Zeng

15

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10 August 2017

Amr Abouelleil

16

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10 August 2017

James Bochicchio

17

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10 August 2017

Sara Chauvin

18

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10 August 2017

Timothy Desmet

19

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10 August 2017

Sharvari Gujja

20

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10 August 2017

Caryn McCowan

21

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10 August 2017

Scott Steelman

23

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10 August 2017

Carsten Struve

26

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10 August 2017

Bruce W Birren

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10 August 2017

language of work or name

English

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publication date

6 February 2012

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Proceedings of the National Academy of Sciences of the United States of America

10 August 2017

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10 August 2017

109

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10 August 2017

8

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10 August 2017

3065-3070

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Presence of enterohemorrhagic Escherichia coli ST678/O104:H4 in France prior to 2011

10 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286951

Prospective genomic characterization of the German enterohemorrhagic Escherichia coli O104:H4 outbreak by rapid next generation sequencing technology

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286951

Origins of the E. coli strain causing an outbreak of hemolytic-uremic syndrome in Germany

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286951

Outbreak of haemolytic uraemic syndrome and bloody diarrhoea due to Escherichia coli O104:H4, south-west France, June 2011.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286951

Genome sequence analyses of two isolates from the recent Escherichia coli outbreak in Germany reveal the emergence of a new pathotype: Entero-Aggregative-Haemorrhagic Escherichia coli (EAHEC)

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286951

Characterisation of the Escherichia coli strain associated with an outbreak of haemolytic uraemic syndrome in Germany, 2011: a microbiological study

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286951

Characteristics of the enteroaggregative Shiga toxin/verotoxin-producing Escherichia coli O104:H4 strain causing the outbreak of haemolytic uraemic syndrome in Germany, May to June 2011.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286951

Large and ongoing outbreak of haemolytic uraemic syndrome, Germany, May 2011.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286951

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286951

Bacillus anthracis comparative genome analysis in support of the Amerithrax investigation

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286951

Whole-genome sequencing and social-network analysis of a tuberculosis outbreak

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286951

Evolution of MRSA during hospital transmission and intercontinental spread

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286951

Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286951

Comparisons of dN/dS are time dependent for closely related bacterial genomes

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286951

Emerging foodborne pathogens: Escherichia coli O157:H7 as a model of entry of a new pathogen into the food supply of the developed world

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286951

Escherichia coli O104:H4 south-west France, June 2011.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286951

Open-Source Genomic Analysis of Shiga-Toxin–Producing E. coli O104:H4

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286951

Epidemic profile of Shiga-toxin-producing Escherichia coli O104:H4 outbreak in Germany

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286951

A framework for variation discovery and genotyping using next-generation DNA sequencing data

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286951

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286951

progressiveMauve: multiple genome alignment with gene gain, loss and rearrangement

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3286951

The new face of enterohaemorrhagic Escherichia coli infections

25 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22315421

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.1121491109

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10 August 2017

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10 August 2017

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