(Q35785428)

10 August 2017

title

A new method to improve network topological similarity search: applied to fold recognition (English)

1 reference

10 August 2017

John Lhota

1

1 reference

10 August 2017

Ruth Hauptman

2

1 reference

10 August 2017

Thomas Hart

3

1 reference

10 August 2017

Clara Ng

4

1 reference

10 August 2017

Lei Xie

5

1 reference

10 August 2017

language of work or name

English

0 references

publication date

25 February 2015

1 reference

10 August 2017

1 reference

10 August 2017

volume

31

1 reference

10 August 2017

issue

13

1 reference

10 August 2017

page(s)

2106-2114

1 reference

Global view of the protein universe

10 August 2017

cites work

1 reference

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12 July 2018

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12 July 2018

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12 July 2018

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On the evolutionary origins of "Fold Space Continuity": a study of topological convergence and divergence in mixed alpha-beta domains.

12 July 2018

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Protein interface conservation across structure space

12 July 2018

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12 July 2018

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12 July 2018

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The continuity of protein structure space is an intrinsic property of proteins

12 July 2018

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Structural relationships among proteins with different global topologies and their implications for function annotation strategies

12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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Detecting evolutionary relationships across existing fold space, using sequence order-independent profile-profile alignments.

12 July 2018

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12 July 2018

1 reference

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12 July 2018

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12 July 2018

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Clustering by passing messages between data points

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481851

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12 July 2018

1 reference

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Less is more: towards an optimal universal description of protein folds.

12 July 2018

1 reference

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12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

1 reference

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Clustering of protein structural fragments reveals modular building block approach of nature.

12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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On the evolution of protein folds: are similar motifs in different protein folds the result of convergence, insertion, or relics of an ancient peptide world?

12 July 2018

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12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481851

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12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481851

Profile hidden Markov models

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481851

CATH--a hierarchic classification of protein domain structures

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481851

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12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481851

Structural trees for protein superfamilies

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481851

Comparative protein modelling by satisfaction of spatial restraints

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481851

SCOP: a structural classification of proteins database for the investigation of sequences and structures

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481851

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12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481851

Genome-wide inferring gene-phenotype relationship by walking on the heterogeneous network.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481851

Quantifying the evolutionary divergence of protein structures: the role of function change and function conservation.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481851

A 'periodic table' for protein structures.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4481851

Mean shift: a robust approach toward feature space analysis

25 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTV125

Why so many clustering algorithms

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTV125

Loop fold nature of globular proteins

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25717198

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Using multiple structure alignments, fast model building, and energetic analysis in fold recognition and homology modeling

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25717198

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

On the role of structural information in remote homology detection and sequence alignment: new methods using hybrid sequence profiles

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25717198

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/BIOINFORMATICS/BTV125

1 reference

journals/bioinformatics/LhotaHHNX15

10 August 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

10 August 2017

1 reference