(Q35792575)

10 August 2017

Postnatal epigenetic regulation of intestinal stem cells requires DNA methylation and is guided by the microbiome (English)

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10 August 2017

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Lynn Bry

15

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Sean R. Moore

object named as

Sean R Moore

20

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Hui Wang

12

object named as

Hui Wang

1 reference

10 August 2017

Da-Hai Yu

1

1 reference

10 August 2017

Manasi Gadkari

2

1 reference

10 August 2017

Quan Zhou

3

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10 August 2017

Shiyan Yu

4

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10 August 2017

Nan Gao

5

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10 August 2017

Yongtao Guan

6

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10 August 2017

Deborah Schady

7

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10 August 2017

Tony N Roshan

8

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10 August 2017

Miao-Hsueh Chen

9

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10 August 2017

Eleonora Laritsky

10

1 reference

10 August 2017

Zhongqi Ge

11

1 reference

10 August 2017

Rui Chen

13

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10 August 2017

Caroline Westwater

14

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10 August 2017

Robert A Waterland

16

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10 August 2017

Chelsea Moriarty

17

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10 August 2017

Cindy Hwang

18

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10 August 2017

Alton G Swennes

19

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10 August 2017

Lanlan Shen

21

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10 August 2017

language of work or name

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30 September 2015

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10 August 2017

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10 August 2017

16

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10 August 2017

211

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https://scigraph.springernature.com/pub.10.1186/s13059-015-0763-5

10 August 2017

0 references

cites work

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Analysis of gene-environment interactions in postnatal development of the mammalian intestine

12 July 2018

1 reference

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Gut microbiota as an epigenetic regulator: pilot study based on whole-genome methylation analysis

12 July 2018

1 reference

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DNA methylation is required for the control of stem cell differentiation in the small intestine

12 July 2018

1 reference

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Broadly permissive intestinal chromatin underlies lateral inhibition and cell plasticity.

12 July 2018

1 reference

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Comparison and quantitative verification of mapping algorithms for whole-genome bisulfite sequencing.

12 July 2018

1 reference

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Major epigenetic development distinguishing neuronal and non-neuronal cells occurs postnatally in the murine hypothalamus

12 July 2018

1 reference

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Influence of bacteria on epigenetic gene control

12 July 2018

1 reference

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A multicenter study to standardize reporting and analyses of fluorescence-activated cell-sorted murine intestinal epithelial cells

12 July 2018

1 reference

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DNA methylation dynamics during intestinal stem cell differentiation reveals enhancers driving gene expression in the villus

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Developmentally programmed 3' CpG island methylation confers tissue- and cell-type-specific transcriptional activation

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

The gut microbiota--masters of host development and physiology

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

DNA methylation analysis in the intestinal epithelium-effect of cell separation on gene expression and methylation profile

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

The dynamics of genome-wide DNA methylation reprogramming in mouse primordial germ cells

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Transcriptional networks in liver and intestinal development

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Tumour suppressor RNF43 is a stem-cell E3 ligase that induces endocytosis of Wnt receptors

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Functions of DNA methylation: islands, start sites, gene bodies and beyond

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Fast gapped-read alignment with Bowtie 2

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Cdc42 and Rab8a are critical for intestinal stem cell division, survival, and differentiation in mice

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Polymorphisms in 1-carbon metabolism, epigenetics and folate-related pathologies

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Optimality in the development of intestinal crypts

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Dnmt3a is essential for hematopoietic stem cell differentiation

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Epigenetic control of the host gene by commensal bacteria in large intestinal epithelial cells

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Human nutrition, the gut microbiome and the immune system

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

CpG islands and the regulation of transcription

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Orphan CpG islands identify numerous conserved promoters in the mammalian genome

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Epithelial stem cells: an epigenetic and Wnt-centric perspective

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Dnmt1 and Dnmt3a maintain DNA methylation and regulate synaptic function in adult forebrain neurons.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Epigenetic maturation in colonic mucosa continues beyond infancy in mice

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Differential methylation of tissue- and cancer-specific CpG island shores distinguishes human induced pluripotent stem cells, embryonic stem cells and fibroblasts

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Lysophosphatidic acid stimulates the intestinal brush border Na(+)/H(+) exchanger 3 and fluid absorption via LPA(5) and NHERF2.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Invasive and indigenous microbiota impact intestinal stem cell activity through multiple pathways in Drosophila

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Identification of stem cells in small intestine and colon by marker gene Lgr5

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Epigenetic epidemiology of the developmental origins hypothesis

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Epigenetic mechanisms and gastrointestinal development

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

De novo CpG island methylation in human cancer cells

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Introduction of Sd(a) carbohydrate antigen in gastrointestinal cancer cells eliminates selectin ligands and inhibits metastasis

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Essential role for de novo DNA methyltransferase Dnmt3a in paternal and maternal imprinting

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Role of glycosylation in development

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Structure and function of eukaryotic DNA methyltransferases

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Sensitive and quantitative universal Pyrosequencing methylation analysis of CpG sites

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Altered glycosylation in inflammatory bowel disease: a possible role in cancer development

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Regulation of the intestinal glycoprotein glycosylation during postnatal development: role of hormonal and nutritional factors

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Developmental regulation of intestinal angiogenesis by indigenous microbes via Paneth cells

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Dnmt3a and Dnmt1 functionally cooperate during de novo methylation of DNA.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Increased enterocyte production in gnotobiotic rats mono-associated with Lactobacillus rhamnosus GG.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Glycans as legislators of host-microbial interactions: spanning the spectrum from symbiosis to pathogenicity

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Loss of genomic methylation causes p53-dependent apoptosis and epigenetic deregulation

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Role of oligosaccharides and glycoconjugates in intestinal host defense.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

A model of host-microbial interactions in an open mammalian ecosystem

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Transit time of epithelial cells in the small intestines of germfree mice and ex-germfree mice associated with indigenous microorganisms

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Postnatal development: coordination of feeding, digestion, and metabolism

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

The gnotobiotic animal as a tool in the study of host microbial relationships

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Origin, differentiation and renewal of the four main epithelial cell types in the mouse small intestine. V. Unitarian Theory of the origin of the four epithelial cell types

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Postnatal development of rat colon epithelial cells is associated with changes in the expression of the beta 1,4-N-acetylgalactosaminyltransferase involved in the synthesis of Sda antigen of alpha 2,6-sialyltransferase activity towards N-acetyl-lact

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Optimizing annealing temperature overcomes bias in bisulfite PCR methylation analysis.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Methyl balance and transmethylation fluxes in humans.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Cis elements of the villin gene control expression in restricted domains of the vertical (crypt) and horizontal (duodenum, cecum) axes of the intestine.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4589031

Microbial-host interactions specifically control the glycosylation pattern in intestinal mouse mucosa

25 September 2018

1 reference

12 December 2020

Monoclonal antibodies against Lgr5 identify human colorectal cancer stem cells

1 reference

12 December 2020

More than just a gut instinct-the potential interplay between a baby's nutrition, its gut microbiome, and the epigenome

1 reference

12 December 2020

Glycoprotein metabolism in inflammatory and neoplastic diseases of the human colon

1 reference

12 December 2020

Whole population cell kinetics and postnatal development of the mouse intestinal epithelium

1 reference

12 December 2020

Influence of the normal flora on mucosal morphology and cellular renewal in the ileum. A comparison of germ-free and conventional mice

1 reference

12 December 2020

10.1186/S13059-015-0763-5

Identifiers

DOI

1 reference

Dimensions Publication ID

10 August 2017

1046243465

0 references

Fatcat ID

release_kmqouelv4fe67jkl4geymjukmy

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/kmqouelv4fe67jkl4geymjukmy

24 November 2022

mapped directly with Wikidata item

PMCID

4589031

1 reference

10 August 2017

1 reference