(Q35806423)

10 August 2017

Fingerprinting the folding of a group I precursor RNA (English)

1 reference

10 August 2017

V L Emerick

1

1 reference

PMCID

44879

10 August 2017

S A Woodson

series ordinal

2

1 reference

PMCID

44879

10 August 2017

language of work or name

English

0 references

publication date

1 October 1994

1 reference

Proceedings of the National Academy of Sciences of the United States of America

10 August 2017

1 reference

10 August 2017

91

1 reference

10 August 2017

9675-9679

1 reference

10 August 2017

21

1 reference

The Leptomonas collosoma spliced leader RNA can switch between two alternate structural forms

10 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=44879

An alternative helix in the 26S rRNA promotes excision and integration of the Tetrahymena intervening sequence

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=44879

Guanosine binding to the Tetrahymena ribozyme: thermodynamic coupling with oligonucleotide binding

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=44879

Kinetics and thermodynamics of folding in model proteins

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=44879

An independently folding domain of RNA tertiary structure within the Tetrahymena ribozyme

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=44879

Intermolecular exon ligation of the rRNA precursor of Tetrahymena: oligonucleotides can function as 5' exons

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=44879

Ribozyme inhibitors: deoxyguanosine and dideoxyguanosine are competitive inhibitors of self-splicing of the Tetrahymena ribosomal ribonucleic acid precursor

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=44879

Protein-binding site at the immunoglobulin mu membrane polyadenylylation signal: possible role in transcription termination

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=44879

The guanosine binding site of the Tetrahymena ribozyme

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=44879

Improved free-energy parameters for predictions of RNA duplex stability

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=44879

Direct measurement of oligonucleotide substrate binding to wild-type and mutant ribozymes from Tetrahymena

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=44879

Intermediates in the folding reactions of small proteins

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=44879

Alternative secondary structures in the 5' exon affect both forward and reverse self-splicing of the Tetrahymena intervening sequence RNA.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=44879

Messenger RNA Splicing in Yeast: Clues to Why the Spliceosome Is a Ribonucleoprotein

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=44879

Biochemical Mechanisms of Constitutive and Regulated Pre-mRNA Splicing

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=44879

Evidence for processivity and two-step binding of the RNA substrate from studies of J1/2 mutants of the Tetrahymena ribozyme

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=44879

A compilation of large subunit (23S-like) ribosomal RNA sequences presented in a secondary structure format

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=44879

Exon sequences distant from the splice junction are required for efficient self-splicing of the Tetrahymena IVS.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=44879

RNA substrate binding site in the catalytic core of the Tetrahymena ribozyme

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=44879

Tertiary Structure Around the Guanosine-Binding Site of the Tetrahymena Ribozyme

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=44879

Attenuation in the Escherichia coli tryptophan operon: role of RNA secondary structure involving the tryptophan codon region

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=44879

A mechanism to enhance mRNA splicing fidelity: the RNA-dependent ATPase Prp16 governs usage of a discard pathway for aberrant lariat intermediates

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=44879

Comparison of the open complexes formed by RNA polymerase at the Escherichia coli lac UV5 promoter.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=44879

Self-splicing of the Tetrahymena pre-rRNA is decreased by misfolding during transcription

25 September 2018

1 reference

12 December 2020

The U5 and U6 small nuclear RNAs as active site components of the spliceosome

1 reference

12 December 2020

The molecular mechanism of thermal unfolding of Escherichia coli formylmethionine transfer RNA

1 reference

12 December 2020

Rapid chemical probing of conformation in 16 S ribosomal RNA and 30 S ribosomal subunits using primer extension

1 reference

12 December 2020

Analysis of ultraviolet-induced RNA-RNA cross-links: a means for probing RNA structure-function relationships

1 reference

12 December 2020

The self-splicing RNA of Tetrahymena is trapped in a less active conformation by gel purification

1 reference

12 December 2020

Group I intron self-splicing with adenosine: evidence for a single nucleoside-binding site

1 reference

12 December 2020

Dynamics of ribozyme binding of substrate revealed by fluorescence-detected stopped-flow methods

1 reference

12 December 2020

Monitoring of the cooperative unfolding of the sunY group I intron of bacteriophage T4. The active form of the sunY ribozyme is stabilized by multiple interactions with 3' terminal intron components

1 reference

12 December 2020

The barriers in protein folding

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.91.21.9675

1 reference

10 August 2017

0 references

1 reference

10 August 2017

1 reference

PMCID

44879