(Q35810625)

10 August 2017

Spectrum of diverse genomic alterations define non-clear cell renal carcinoma subtypes (English)

1 reference

10 August 2017

1 reference

10

Kanika Bajaj Pahuja

0 references

Julian Gehring

object named as

Julian S Gehring

31

0 references

Samuel Peña-Llopis

object named as

Samuel Peña-Llopis

16

0 references

Nick Grishin

28

object named as

Nick V Grishin

1 reference

10 August 2017

36

Yair Lotan

1 reference

10 August 2017

4

Zora Modrusan

1 reference

10 August 2017

Steffen Durinck

1

1 reference

10 August 2017

Eric W Stawiski

2

1 reference

10 August 2017

Andrea Pavía-Jiménez

3

1 reference

10 August 2017

Payal Kapur

5

1 reference

10 August 2017

Bijay S Jaiswal

6

1 reference

10 August 2017

Na Zhang

7

1 reference

10 August 2017

Vanina Toffessi-Tcheuyap

8

1 reference

10 August 2017

Thong T Nguyen

9

1 reference

10 August 2017

Ying-Jiun Chen

11

1 reference

10 August 2017

Sadia Saleem

12

1 reference

10 August 2017

Subhra Chaudhuri

13

1 reference

10 August 2017

Sherry Heldens

14

1 reference

10 August 2017

Marlena Jackson

15

1 reference

10 August 2017

Joseph Guillory

17

1 reference

10 August 2017

Karen Toy

18

1 reference

10 August 2017

Connie Ha

19

1 reference

10 August 2017

Corissa J Harris

20

1 reference

10 August 2017

Eboni Holloman

21

1 reference

10 August 2017

Haley M Hill

22

1 reference

10 August 2017

Jeremy Stinson

23

1 reference

10 August 2017

Celina Sanchez Rivers

24

1 reference

10 August 2017

Vasantharajan Janakiraman

25

1 reference

10 August 2017

Weiru Wang

26

1 reference

10 August 2017

Lisa N Kinch

27

1 reference

10 August 2017

Peter M Haverty

29

1 reference

10 August 2017

Bernard Chow

30

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10 August 2017

Jens Reeder

32

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10 August 2017

Gregoire Pau

33

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10 August 2017

Thomas D Wu

34

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10 August 2017

Vitaly Margulis

35

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10 August 2017

Arthur Sagalowsky

37

1 reference

10 August 2017

Ivan Pedrosa

38

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10 August 2017

Frederic J de Sauvage

39

1 reference

10 August 2017

James Brugarolas

40

1 reference

10 August 2017

Somasekar Seshagiri

41

1 reference

10 August 2017

language of work or name

English

0 references

publication date

17 November 2014

1 reference

10 August 2017

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10 August 2017

47

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10 August 2017

13-21

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10 August 2017

1

1 reference

https://scigraph.springernature.com/pub.10.1038/ng.3146

10 August 2017

0 references

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Diagnostic accuracy of segmental enhancement inversion for the diagnosis of renal oncocytoma using biphasic computed tomography (CT) and multiphase contrast-enhanced magnetic resonance imaging (MRI).

11 July 2018

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Next-generation sequencing of translocation renal cell carcinoma reveals novel RNA splicing partners and frequent mutations of chromatin-remodeling genes

11 July 2018

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11 July 2018

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11 July 2018

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11 July 2018

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The International Society of Urological Pathology (ISUP) Vancouver Classification of Renal Neoplasia

11 July 2018

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11 July 2018

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Comprehensive molecular characterization of clear cell renal cell carcinoma

11 July 2018

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Mutational heterogeneity in cancer and the search for new cancer-associated genes

11 July 2018

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A novel germline mutation in BAP1 predisposes to familial clear-cell renal cell carcinoma.

11 July 2018

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Germline BAP1 mutations predispose to renal cell carcinomas

11 July 2018

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Targeted therapies and the treatment of non-clear cell renal cell carcinoma

11 July 2018

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11 July 2018

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11 July 2018

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Deciphering signatures of mutational processes operative in human cancer

11 July 2018

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The mitochondrial transporter family SLC25: identification, properties and physiopathology

11 July 2018

1 reference

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Phase II and biomarker study of the dual MET/VEGFR2 inhibitor foretinib in patients with papillary renal cell carcinoma

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Analysis of 6,515 exomes reveals the recent origin of most human protein-coding variants

11 July 2018

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Succinate dehydrogenase kidney cancer: an aggressive example of the Warburg effect in cancer

11 July 2018

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Comprehensive genomic analysis identifies SOX2 as a frequently amplified gene in small-cell lung cancer

11 July 2018

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Recurrent R-spondin fusions in colon cancer

11 July 2018

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Renal cortical tumors: use of multiphasic contrast-enhanced MR imaging to differentiate benign and malignant histologic subtypes.

11 July 2018

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Integrative genome-wide expression profiling identifies three distinct molecular subgroups of renal cell carcinoma with different patient outcome

11 July 2018

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MuSiC: identifying mutational significance in cancer genomes

11 July 2018

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The metabolic basis of kidney cancer

11 July 2018

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BAP1 loss defines a new class of renal cell carcinoma

11 July 2018

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AMPK regulates NADPH homeostasis to promote tumour cell survival during energy stress

11 July 2018

1 reference

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Mutational processes molding the genomes of 21 breast cancers

11 July 2018

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Strelka: accurate somatic small-variant calling from sequenced tumor-normal sample pairs

11 July 2018

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Human achaete-scute homolog-1 expression in neuroendocrine breast carcinoma

11 July 2018

1 reference

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A novel recurrent mutation in MITF predisposes to familial and sporadic melanoma

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Molecular characterization of 82 patients with pyruvate dehydrogenase complex deficiency. Structural implications of novel amino acid substitutions in E1 protein.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Generation of a mouse model of Von Hippel-Lindau kidney disease leading to renal cancers by expression of a constitutively active mutant of HIF1α.

11 July 2018

1 reference

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AMP-activated protein kinase: nature's energy sensor

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Clinical genomics of renal epithelial tumors

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

A framework for variation discovery and genotyping using next-generation DNA sequencing data

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Improving the assessment of the outcome of nonsynonymous SNVs with a consensus deleteriousness score, Condel.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Reactome: a database of reactions, pathways and biological processes

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Differential expression analysis for sequence count data

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Diverse somatic mutation patterns and pathway alterations in human cancers

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Molecular pathology of renal oncocytoma: a review

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Molecular pathology of chromophobe renal cell carcinoma: a review

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

The genetic basis of kidney cancer: a metabolic disease

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Fast and SNP-tolerant detection of complex variants and splicing in short reads

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Somatic mutations in p85alpha promote tumorigenesis through class IA PI3K activation

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

PDH E1β deficiency with novel mutations in two patients with Leigh syndrome

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

COSMIC (the Catalogue of Somatic Mutations in Cancer): a resource to investigate acquired mutations in human cancer

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

PICNIC: an algorithm to predict absolute allelic copy number variation with microarray cancer data

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

ShortRead: a bioconductor package for input, quality assessment and exploration of high-throughput sequence data

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

AMPK in Health and Disease

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Fast and accurate short read alignment with Burrows-Wheeler transform

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

High-resolution DNA copy number and gene expression analyses distinguish chromophobe renal cell carcinomas and renal oncocytomas

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Hepatocyte growth factor activator inhibitor type 1 regulates epithelial to mesenchymal transition through membrane-bound serine proteinases

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Novel MITF targets identified using a two-step DNA microarray strategy

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Microphthalmia-associated transcription factor is a critical transcriptional regulator of melanoma inhibitor of apoptosis in melanomas

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Whole genome SNP arrays as a potential diagnostic tool for the detection of characteristic chromosomal aberrations in renal epithelial tumors.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Xp11 translocation renal cell carcinoma in adults: expanded clinical, pathologic, and genetic spectrum

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Spatial smoothing and hot spot detection for CGH data using the fused lasso

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Regulation of AMP-activated protein kinase by a pseudosubstrate sequence on the gamma subunit

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Gene expression profiling separates chromophobe renal cell carcinoma from oncocytoma and identifies vesicular transport and cell junction proteins as differentially expressed genes.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Mutations in BHD and TP53 genes, but not in HNF1beta gene, in a large series of sporadic chromophobe renal cell carcinoma

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

The prevalence and significance of PDZ domain-phosphoinositide interactions

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Mutagenesis at methylated CpG sequences.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Structural characterization of autoinhibited c-Met kinase produced by coexpression in bacteria with phosphatase

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Characterization of the role of gamma2 R531G mutation in AMP-activated protein kinase in cardiac hypertrophy and Wolff-Parkinson-White syndrome

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Fatal congenital heart glycogenosis caused by a recurrent activating R531Q mutation in the gamma 2-subunit of AMP-activated protein kinase (PRKAG2), not by phosphorylase kinase deficiency

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Elevation of Hook1 in a disease model of Batten disease does not affect a novel interaction between Ankyrin G and Hook1

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Melanocytes and the microphthalmia transcription factor network

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Metagenes and molecular pattern discovery using matrix factorization

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Human non-synonymous SNPs: server and survey

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Accounting for human polymorphisms predicted to affect protein function

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Structural basis of oncogenic activation caused by point mutations in the kinase domain of the MET proto-oncogene: modeling studies

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

dbSNP: the NCBI database of genetic variation

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Molecular cloning and functional characterization of a human homologue of centaurin-alpha

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Novel mutations of the MET proto-oncogene in papillary renal carcinomas.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Germline and somatic mutations in the tyrosine kinase domain of the MET proto-oncogene in papillary renal carcinomas

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Phosphorylation of serine 985 negatively regulates the hepatocyte growth factor receptor kinase

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

A clear picture of renal cell carcinoma

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Molecular characterization of hepatocellular adenomas developed in patients with glycogen storage disease type I.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Molecular heterogeneity of TFE3 activation in renal cell carcinomas.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Chromophobe renal cell carcinoma: histomorphologic characteristics and evaluation of conventional pathologic prognostic parameters in 145 cases.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Induction of BAIAP3 by the EWS-WT1 chimeric fusion implicates regulated exocytosis in tumorigenesis.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

Hepatocellular carcinoma in glycogen storage disease type IV.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489427

MRI Features of Renal Oncocytoma and Chromophobe Renal Cell Carcinoma

25 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNG.3146

Glycogen Storage Disease Type Ia and VI Associated With Hepatocellular Carcinoma: Two Case Reports

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNG.3146

microphthalmia, a critical factor in melanocyte development, defines a discrete transcription factor family

21 January 2018

1 reference

12 December 2020

Papillary renal tumors. Morphologic, cytochemical, and genotypic features

1 reference

12 December 2020

Editorial comment from Dr Picken to Molecular pathology of renal oncocytoma: a review

1 reference

12 December 2020

Editorial comment from Dr Young to Molecular pathology of renal oncocytoma: A review

1 reference

12 December 2020

Mutation of the p53 tumour suppressor gene occurs preferentially in the chromophobe type of renal cell tumour

1 reference

12 December 2020

Biology and clinical relevance of the micropthalmia family of transcription factors in human cancer

1 reference

12 December 2020

Editorial comment to molecular pathology of chromophobe renal cell carcinoma: a review

1 reference

12 December 2020

Identifiers

DOI

10.1038/NG.3146

1 reference

Dimensions Publication ID

10 August 2017

0 references

1 reference

10 August 2017

1 reference