(Q35849355)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26597966%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

title

Telomere binding protein TRB1 is associated with promoters of translation machinery genes in vivo (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26597966%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26597966%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

Šárka Schořová

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26597966%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

Jirí Fajkus

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26597966%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

author name string

Petra Procházková Schrumpfová

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26597966%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

Ivona Vychodilová

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26597966%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

Vojtěch Dvořáček

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26597966%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

publication date

23 November 2015

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26597966%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

number of pages

18

1 reference

inferred from page(s)

published in

Plant Molecular Biology

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26597966%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

volume

90

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26597966%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

issue

1-2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26597966%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

page(s)

189-206

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26597966%20AND%20SRC:MED&resulttype=core&format=json

https://scigraph.springernature.com/pub.10.1007/s11103-015-0409-8

1 March 2020

exact match

0 references

cites work

A TRF1-controlled common fragile site containing interstitial telomeric sequences

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Human telomeric protein TRF2 associates with genomic double-strand breaks as an early response to DNA damage.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Arabidopsis nucleolar protein database (AtNoPDB)

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Intronic noncoding RNAs and splicing.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Mitochondrial localization of telomeric protein TIN2 links telomere regulation to metabolic control

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Two RNA subunits and POT1a are components of Arabidopsis telomerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

How the human telomeric proteins TRF1 and TRF2 recognize telomeric DNA: a view from high-resolution crystal structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Shelterin: the protein complex that shapes and safeguards human telomeres

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Telomeric proteins regulate episomal maintenance of Epstein-Barr virus origin of plasmid replication

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

AtTRB1, a telomeric DNA-binding protein from Arabidopsis, is concentrated in the nucleolus and shows highly dynamic association with chromatin.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

MUSCLE: multiple sequence alignment with high accuracy and high throughput

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Gene Expression Omnibus: NCBI gene expression and hybridization array data repository

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Telomeres in evolution and evolution of telomeres

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Interphase chromosomes in Arabidopsis are organized as well defined chromocenters from which euchromatin loops emanate

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Distribution of short interstitial telomere motifs in two plant genomes: putative origin and function

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Comparison between TRF2 and TRF1 of their telomeric DNA-bound structures and DNA-binding activities.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Single-Myb-histone proteins from Arabidopsis thaliana: a quantitative study of telomere-binding specificity and kinetics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Chromosome end protection by blunt-ended telomeres

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Protection of internal (TTAGGG)n repeats in Chinese hamster cells by telomeric protein TRF1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Interactions of putative telomere-binding proteins in Arabidopsis thaliana: identification of functional TRF2 homolog in plants.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Fast gapped-read alignment with Bowtie 2

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

POT1-TPP1 enhances telomerase processivity by slowing primer dissociation and aiding translocation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Normalization of ChIP-seq data with control

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

The four members of the gene family encoding the Arabidopsis thaliana translation elongation factor EF-1 alpha are actively transcribed

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Chromosome ends: different sequences may provide conserved functions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Global sequence characterization of rice centromeric satellite based on oligomer frequency analysis in large-scale sequencing data

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Non-telomeric activities of telomerase.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Chromosomal phylogeny and karyotype evolution in x=7 crucifer species (Brassicaceae).

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

In synergy with various cis-acting elements, plant insterstitial telomere motifs regulate gene expression in Arabidopsis root meristems

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

The maize Single myb histone 1 gene, Smh1, belongs to a novel gene family and encodes a protein that binds telomere DNA repeats in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Mammalian Rap1 controls telomere function and gene expression through binding to telomeric and extratelomeric sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

A human interstitial telomere associates in vivo with specific TRF2 and TIN2 proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

RAP, RAP, open up! New wrinkles for RAP1 in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Extending the model of Arabidopsis telomere length and composition across Brassicaceae

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Solution structure of a telomeric DNA complex of human TRF1

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Mitochondrial genome diversity: evolution of the molecular architecture and replication strategy.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Using the telobox to search for plant telomere binding proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Arabidopsis POT1A interacts with TERT-V(I8), an N-terminal splicing variant of telomerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Integrative epigenomic mapping defines four main chromatin states in Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Differential transcript accumulation and subcellular localization of Arabidopsis ribosomal proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Sequence logos: a new way to display consensus sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Characterization of two Arabidopsis thaliana myb-like proteins showing affinity to telomeric DNA sequence.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Mapping of interaction domains of putative telomere-binding proteins AtTRB1 and AtPOT1b from Arabidopsis thaliana

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Telomere repeat binding proteins are functional components of Arabidopsis telomeres and interact with telomerase.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

The Functional Topography of the Arabidopsis Genome Is Organized in a Reduced Number of Linear Motifs of Chromatin States

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Removal of shelterin reveals the telomere end-protection problem

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Mammalian telomeres resemble fragile sites and require TRF1 for efficient replication

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

ngs.plot: Quick mining and visualization of next-generation sequencing data by integrating genomic databases

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

The human TTAGGG repeat factors 1 and 2 bind to a subset of interstitial telomeric sequences and satellite repeats

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Mutational analysis of fibrillarin and its mobility in living human cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

FRAP analysis of binding: proper and fitting

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Telomere-independent Rap1 is an IKK adaptor and regulates NF-kappaB-dependent gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Plant interstitial telomere motifs participate in the control of gene expression in root meristems

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Internal telomeric repeats and 'TCP domain' protein-binding sites co-operate to regulate gene expression in Arabidopsis thaliana cycling cells.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Arabidopsis TFL2/LHP1 specifically associates with genes marked by trimethylation of histone H3 lysine 27.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Interstitial telomere-like repeats in the Arabidopsis thaliana genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Evolution of linear chromosomes and multipartite genomes in yeast mitochondria.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Telomeres: moonlighting by DNA repair proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

GoMiner: a resource for biological interpretation of genomic and proteomic data

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

High-Throughput GoMiner, an 'industrial-strength' integrative gene ontology tool for interpretation of multiple-microarray experiments, with application to studies of Common Variable Immune Deficiency (CVID).

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Nontelomeric TRF2-REST interaction modulates neuronal gene silencing and fate of tumor and stem cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Model-based analysis of ChIP-Seq (MACS)

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

PePr: a peak-calling prioritization pipeline to identify consistent or differential peaks from replicated ChIP-Seq data.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-015-0409-8

Features of Arabidopsis genes and genome discovered using full-length cDNAs

21 January 2018

1 reference

12 December 2020

Functional characterization of domains in AtTRB1, a putative telomere-binding protein in Arabidopsis thaliana

1 reference

12 December 2020

Elucidation of the DNA end-replication problem in Saccharomyces cerevisiae

1 reference

12 December 2020

A class of nonribosomal nucleolar components is located in chromosome periphery and in nucleolus-derived foci during anaphase and telophase

1 reference

12 December 2020

Chromatin techniques for plant cells

1 reference

12 December 2020

Chromatin dynamics of plant telomeres and ribosomal genes

1 reference

12 December 2020

10.1007/S11103-015-0409-8

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26597966%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

1 reference