(Q35891634)

11 August 2017

'In-line attack' conformational effect plays a modest role in an enzyme-catalyzed RNA cleavage: a free energy simulation study (English)

1 reference

11 August 2017

Hong Li

3

0 references

author name string

Donghong Min

series ordinal

1

1 reference

11 August 2017

Song Xue

series ordinal

2

1 reference

11 August 2017

Wei Yang

series ordinal

4

1 reference

11 August 2017

language of work or name

English

0 references

publication date

6 June 2007

1 reference

11 August 2017

6

1 reference

based on heuristic

inferred from page(s)

published in

Nucleic Acids Research

1 reference

11 August 2017

35

1 reference

11 August 2017

12

1 reference

11 August 2017

4001-4006

1 reference

Electrostatic basis for enzyme catalysis

11 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1919504

Computational approaches: reaction trajectories, structures, and atomic motions. Enzyme reactions and proficiency

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1919504

Tertiary contacts distant from the active site prime a ribozyme for catalysis

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1919504

Structure, folding and mechanisms of ribozymes

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1919504

The structure-function dilemma of the hammerhead ribozyme

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1919504

A guide to ions and RNA structure

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1919504

11 July 2018

Ribozyme speed limits

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1919504

Crystal structures of restrictocin-inhibitor complexes with implications for RNA recognition and base flipping

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1919504

Substrate conformational transitions in the active site of chorismate mutase: their role in the catalytic mechanism

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1919504

Relationship between internucleotide linkage geometry and the stability of RNA.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1919504

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1919504

Two autolytic processing reactions of a satellite RNA proceed with inversion of configuration

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1919504

RNA recognition and cleavage by a splicing endonuclease.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1919504

Conformational effects in enzyme catalysis: QM/MM free energy calculation of the 'NAC' contribution in chorismate mutase

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1919504

Mechanisms of Ribozyme-Mediated RNA Cleavage

24 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17553832

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Kinetics and Mechanisms for the Cleavage and Isomerization of the Phosphodiester Bonds of RNA by Brønsted Acids and Bases

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17553832

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKM394

1 reference

11 August 2017

1 reference

11 August 2017

PubMed publication ID

17553832

1 reference