(Q35918092)

11 August 2017

Fatty acid biosynthesis in Mycobacterium tuberculosis: lateral gene transfer, adaptive evolution, and gene duplication (English)

1 reference

Mycobacterium tuberculosis

11 August 2017

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horizontal gene transfer

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1 reference

1 reference

2

1 reference

11 August 2017

Christopher J. Creevey

series ordinal

3

1 reference

11 August 2017

4

James O McInerney

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author name string

Rhoda J Kinsella

series ordinal

1

1 reference

11 August 2017

James O McInerney

series ordinal

4

1 reference

11 August 2017

language of work or name

English

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publication date

13 August 2003

1 reference

Proceedings of the National Academy of Sciences of the United States of America

11 August 2017

1 reference

11 August 2017

100

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11 August 2017

18

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11 August 2017

10320-10325

1 reference

Genome trees and the tree of life

11 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=193559

A phylogenomic approach to bacterial phylogeny: evidence of a core of genes sharing a common history

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=193559

Codon-substitution models for detecting molecular adaptation at individual sites along specific lineages

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=193559

The KEGG databases at GenomeNet

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=193559

Detection of lateral gene transfer among microbial genomes.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=193559

Lateral and oblique gene transfer

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=193559

Deletional bias and the evolution of bacterial genomes

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=193559

MRBAYES: Bayesian inference of phylogenetic trees

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=193559

Evolution of an autotransporter: domain shuffling and lateral transfer from pathogenic Haemophilus to Neisseria

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=193559

Interkingdom gene fusions

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=193559

Mycobacterium tuberculosis in the post-genomic age.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=193559

Statistical methods for detecting molecular adaptation

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=193559

Comparison of the proteome of Mycobacterium tuberculosis strain H37Rv with clinical isolate CDC 1551.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=193559

The role of lateral gene transfer in the evolution of isoprenoid biosynthesis pathways.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=193559

Interpreting the universal phylogenetic tree

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=193559

Comparative genomics of the leprosy and tubercle bacilli

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=193559

Mycolic acids: structure, biosynthesis and physiological functions

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=193559

Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=193559

GCUA: general codon usage analysis

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=193559

Likelihood ratio tests for detecting positive selection and application to primate lysozyme evolution

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=193559

PAML: a program package for phylogenetic analysis by maximum likelihood

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=193559

Molecular evidence for an ancient duplication of the entire yeast genome

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=193559

Biochemistry and molecular genetics of cell-wall lipid biosynthesis in mycobacteria

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=193559

Episodic adaptive evolution of primate lysozymes.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=193559

Unbiased estimation of the rates of synonymous and nonsynonymous substitution

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=193559

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=193559

A codon-based model of nucleotide substitution for protein-coding DNA sequences

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=193559

Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: approximate methods

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=193559

Evolution of the bovine lysozyme gene family: changes in gene expression and reversion of function.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=193559

Concerted evolution of ruminant stomach lysozymes. Characterization of lysozyme cDNA clones from sheep and deer.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=193559

Basic local alignment search tool

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=193559

Adaptive protein evolution at the Adh locus in Drosophila

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=193559

Evidence for horizontal gene transfer in Escherichia coli speciation

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=193559

Comparative genomics study of inverted repeats in bacteria.

11 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1737230100

Eukaryotic genes in Mycobacterium tuberculosis could have a role in pathogenesis and immunomodulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1737230100

Analysis of the proteome of Mycobacterium tuberculosis in silico

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1737230100

An outbreak involving extensive transmission of a virulent strain of Mycobacterium tuberculosis

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1737230100

Adaptive evolution in the stomach lysozymes of foregut fermenters

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1737230100

Predicting adaptive evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1737230100

Adaptive evolution after gene duplication

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1737230100

21 January 2018

Identifiers

DOI

10.1073/PNAS.1737230100

1 reference

11 August 2017

0 references

1 reference

11 August 2017

1 reference