(Q35925632)

English

A pipeline for the systematic identification of non-redundant full-ORF cDNAs for polymorphic and evolutionary divergent genomes: Application to the ascidian Ciona intestinalis.

scientific article published on 27 May 2015

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scholarly article

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16 February 2020

A pipeline for the systematic identification of non-redundant full-ORF cDNAs for polymorphic and evolutionary divergent genomes: Application to the ascidian Ciona intestinalis (English)

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16 February 2020

Ciona intestinalis

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inferred from title

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16 February 2020

Pierre Khoueiry

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16 February 2020

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16 February 2020

Patrick Lemaire

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16 February 2020

Ute Rothbächer

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16 February 2020

Michael J Gilchrist

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Michael J Gilchrist

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Fabrice Daian

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16 February 2020

Batiste Laporte

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16 February 2020

Ilya Patrushev

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16 February 2020

Jun Matsumoto

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16 February 2020

Ken Dewar

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16 February 2020

Kenneth E M Hastings

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16 February 2020

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27 May 2015

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16 February 2020

Developmental Biology

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16 February 2020

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149-163

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Tissue-specific genome editing in Ciona embryos by CRISPR/Cas9.

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Full-length transcriptome assembly from RNA-Seq data without a reference genome

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Evolutionary crossroads in developmental biology: the tunicates.

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Interactome networks and human disease

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The ANISEED database: digital representation, formalization, and elucidation of a chordate developmental program.

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2 October 2017

Polymorphism and divergence within the ascidian genus Ciona

1 reference

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2 October 2017

High-throughput sequence analysis of Ciona intestinalis SL trans-spliced mRNAs: alternative expression modes and gene function correlates

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2 October 2017

Ascidians: an invertebrate chordate model to study Alzheimer's disease pathogenesis

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A large-scale analysis of tissue-specific pathology and gene expression of human disease genes and complexes

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2 October 2017

InterPro: the integrative protein signature database

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2 October 2017

Improved genome assembly and evidence-based global gene model set for the chordate Ciona intestinalis: new insight into intron and operon populations.

1 reference

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2 October 2017

A cDNA resource for the cephalochordate amphioxus Branchiostoma floridae

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The amphioxus genome and the evolution of the chordate karyotype

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2 October 2017

Splign: algorithms for computing spliced alignments with identification of paralogs

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2 October 2017

Evolutionary plasticity of developmental gene regulatory network architecture

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2 October 2017

A multicassette Gateway vector set for high throughput and comparative analyses in ciona and vertebrate embryos

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2 October 2017

Sea Anemone Genome Reveals Ancestral Eumetazoan Gene Repertoire and Genomic Organization

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2 October 2017

Cryptic speciation in a model invertebrate chordate

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2 October 2017

Porcine transcriptome analysis based on 97 non-normalized cDNA libraries and assembly of 1,021,891 expressed sequence tags

1 reference

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2 October 2017

Genomic overview of mRNA 5'-leader trans-splicing in the ascidian Ciona intestinalis

1 reference

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2 October 2017

Formation of the ascidian epidermal sensory neurons: insights into the origin of the chordate peripheral nervous system

1 reference

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BiNGO: a Cytoscape plugin to assess overrepresentation of gene ontology categories in biological networks

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2 October 2017

SL trans-splicing: easy come or easy go?

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2 October 2017

Evolution of Brachyury proteins: identification of a novel regulatory domain conserved within Bilateria

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2 October 2017

Functional expression cloning of Nanog, a pluripotency sustaining factor in embryonic stem cells

1 reference

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2 October 2017

The Draft Genome of Ciona intestinalis: Insights into Chordate and Vertebrate Origins

1 reference

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2 October 2017

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

1 reference

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2 October 2017

From Cdc2 to Cdk1: when did the cell cycle kinase join its cyclin partner?

1 reference

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2 October 2017

Automatic clustering of orthologs and in-paralogs from pairwise species comparisons

1 reference

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2 October 2017

The molecular biology of memory storage: a dialogue between genes and synapses

1 reference

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DNA cloning using in vitro site-specific recombination

1 reference

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Gene ontology: tool for the unification of biology

1 reference

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Understanding, improving and using green fluorescent proteins

1 reference

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2 October 2017

Assembly of polymorphic genomes: algorithms and application to Ciona savignyi

1 reference

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Defining a large set of full-length clones from a Xenopus tropicalis EST project

1 reference

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11 July 2018

Expression cloning of noggin, a new dorsalizing factor localized to the Spemann organizer in Xenopus embryos

1 reference

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11 July 2018

The Tunicate CIONA: A Model System for Understanding the Relationship Between Regeneration and Aging

1 reference

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24 September 2018

Population genetics of cis-regulatory sequences that operate during embryonic development in the sea urchin Strongylocentrotus purpuratus.

1 reference

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Genotype calling and mapping of multisite variants using an Atlantic salmon iSelect SNP array.

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24 September 2018

Highly divergent gene expression programs can lead to similar chordate larval body plans.

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24 September 2018

Gene regulatory networks underlying the compartmentalization of the Ciona central nervous system.

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24 September 2018

Regulatory genes in the ancestral chordate genomes

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24 September 2018

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1 reference

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24 September 2018

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1 reference

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24 September 2018

Regulatory blueprint for a chordate embryo.

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24 September 2018

Molecular evidence from Ciona intestinalis for the evolutionary origin of vertebrate sensory placodes.

1 reference

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24 September 2018

Expression cloning in ascidians: isolation of a novel member of the asctacin protease family

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24 September 2018

Action of morpholinos in Ciona embryos.

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24 September 2018

Expression cloning of Siamois, a Xenopus homeobox gene expressed in dorsal-vegetal cells of blastulae and able to induce a complete secondary axis.

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24 September 2018

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7 January 2021

A cDNA resource from the basal chordateCiona intestinalis

1 reference

https://api.crossref.org/works/10.1016%2FJ.YDBIO.2015.05.014

7 January 2021

Identifiers

10.1016/J.YDBIO.2015.05.014

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16 February 2020

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Europe PubMed Central

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16 February 2020

1 reference

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16 February 2020

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