(Q35930483)

11 August 2017

N-Terminal-Based Targeted, Inducible Protein Degradation in Escherichia coli (English)

1 reference

11 August 2017

1 reference

John W Bostick

3

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Karthik Sekar

object named as

Karthik Sekar

series ordinal

1

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author name string

Andrew M Gentile

series ordinal

2

1 reference

11 August 2017

Keith E J Tyo

series ordinal

4

1 reference

11 August 2017

language of work or name

English

0 references

publication date

22 February 2016

1 reference

11 August 2017

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11 August 2017

11

1 reference

11 August 2017

2

1 reference

11 August 2017

e0149746

1 reference

Creative Commons Attribution 4.0 International

11 August 2017

start time

22 February 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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Dynamic knockdown of E. coli central metabolism for redirecting fluxes of primary metabolites

2 October 2017

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Tunable protein degradation in bacteria

2 October 2017

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A mechanistic framework for noncell autonomous stem cell induction in Arabidopsis

2 October 2017

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Profiling human protein degradome delineates cellular responses to proteasomal inhibition and reveals a feedback mechanism in regulating proteasome homeostasis

2 October 2017

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Rapid and tunable post-translational coupling of genetic circuits

2 October 2017

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Modular extracellular sensor architecture for engineering mammalian cell-based devices

2 October 2017

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The N-degradome of Escherichia coli: limited proteolysis in vivo generates a large pool of proteins bearing N-degrons

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765774

RNA-guided gene activation by CRISPR-Cas9-based transcription factors

2 October 2017

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Tailored fatty acid synthesis via dynamic control of fatty acid elongation

2 October 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765774

j5 DNA assembly design automation software

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765774

Dissecting specific and global transcriptional regulation of bacterial gene expression

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765774

Synthetic biology and the development of tools for metabolic engineering

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765774

Queueing up for enzymatic processing: correlated signaling through coupled degradation

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765774

Small-molecule control of protein degradation using split adaptors.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765774

Growth-rate dependence reveals design principles of plasmid copy number control

2 October 2017

1 reference

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Synthetic biology: applications come of age

2 October 2017

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Toward design-based engineering of industrial microbes

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765774

A single ClpS monomer is sufficient to direct the activity of the ClpA hexamer

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765774

The second wave of synthetic biology: from modules to systems

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765774

Modification of PATase by L/F-transferase generates a ClpS-dependent N-end rule substrate in Escherichia coli

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765774

Structural basis of N-end rule substrate recognition in Escherichia coli by the ClpAP adaptor protein ClpS

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765774

Enzymatic assembly of DNA molecules up to several hundred kilobases

2 October 2017

1 reference

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Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765774

ClpS is an essential component of the N-end rule pathway in Escherichia coli.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765774

MicroRNAs: genomics, biogenesis, mechanism, and function

2 October 2017

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765774

2 October 2017

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0149746

ClpS, a substrate modulator of the ClpAP machine

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765774

Overlapping recognition determinants within the ssrA degradation tag allow modulation of proteolysis.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765774

One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765774

The ClpXP and ClpAP proteases degrade proteins with carboxy-terminal peptide tails added by the SsrA-tagging system

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765774

Independent and tight regulation of transcriptional units in Escherichia coli via the LacR/O, the TetR/O and AraC/I1-I2 regulatory elements

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765774

Gene disruption in Escherichia coli: TcR and KmR cassettes with the option of Flp-catalyzed excision of the antibiotic-resistance determinant

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765774

The RNA chain elongation rate in Escherichia coli depends on the growth rate

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765774

The tac promoter: a functional hybrid derived from the trp and lac promoters

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765774

The N-end rule in bacteria.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765774

Dilution and the theoretical description of growth-rate dependent gene expression

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765774

Tuning the strength of a bacterial N-end rule degradation signal

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765774

Escherichia coli physiology in Luria-Bertani broth

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765774

Protein degradation in Escherichia coli. II. Strain differences in the degradation of protein and nucleic acid resulting from starvation

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765774

Differential rate of ribosomal protein synthesis in Escherichia coli B/r

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765774

Escherichia coli antitoxin MazE as transcription factor: insights into MazE-DNA binding

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765774

Efficient protein depletion by genetically controlled deprotection of a dormant N-degron

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765774

ClpS modulates but is not essential for bacterial N-end rule degradation

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765774

Engineering controllable protein degradation.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765774

Cytoplasmic degradation of ssrA-tagged proteins.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765774

Programmable ligand-controlled riboregulators of eukaryotic gene expression.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765774

ClpA and ClpX ATPases bind simultaneously to opposite ends of ClpP peptidase to form active hybrid complexes

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4765774

Use of the tetracycline promoter for the tightly regulated production of a murine antibody fragment in Escherichia coli

24 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0149746

The relative rates of protein synthesis and degradation in a growing culture of Escherichia coli

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26900850

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Blocking endocytotic mechanisms to improve heterologous protein titers in Saccharomyces cerevisiae

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26900850

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Metabolism of individual proteins in exponentially growing Escherichia coli

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26900850

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0149746

1 reference

11 August 2017

0 references

1 reference

11 August 2017

PubMed publication ID

26900850

1 reference