(Q35935895)

11 August 2017

An advanced draft genome assembly of a desi type chickpea (Cicer arietinum L.). (English)

1 reference

11 August 2017

0 references

Sabiha Parween

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26259924%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

Riti Roy

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26259924%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

Anil K Pole

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26259924%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

B Venkata Suresh

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26259924%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

Gopal Misra

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26259924%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

Mukesh Jain

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26259924%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

Swarup K Parida

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26259924%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

Akhilesh K Tyagi

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26259924%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

Sabhyata Bhatia

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26259924%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

Debasis Chattopadhyay

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26259924%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

language of work or name

English

0 references

publication date

11 August 2015

1 reference

11 August 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26259924%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

volume

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26259924%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

page(s)

12806

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26259924%20AND%20SRC:MED&resulttype=core&format=json

https://scigraph.springernature.com/pub.10.1038/srep12806

31 May 2020

exact match

0 references

cites work

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A combinatorial approach of comprehensive QTL-based comparative genome mapping and transcript profiling identified a seed weight-regulating candidate gene in chickpea

2 October 2017

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Draft genome sequence of adzuki bean, Vigna angularis

2 October 2017

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2 October 2017

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Genome sequence of mungbean and insights into evolution within Vigna species

2 October 2017

1 reference

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Genotyping-by-sequencing based intra-specific genetic map refines a ''QTL-hotspot" region for drought tolerance in chickpea

2 October 2017

1 reference

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An integrated genomic approach for rapid delineation of candidate genes regulating agro-morphological traits in chickpea

2 October 2017

1 reference

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Identification and characterization of Wilt and salt stress-responsive microRNAs in chickpea through high-throughput sequencing

2 October 2017

1 reference

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Genome-wide discovery and differential regulation of conserved and novel microRNAs in chickpea via deep sequencing

2 October 2017

1 reference

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Genome wide SNP identification in chickpea for use in development of a high density genetic map and improvement of chickpea reference genome assembly.

2 October 2017

1 reference

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Genome-based analysis of the transcriptome from mature chickpea root nodules

2 October 2017

1 reference

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Exploring germplasm diversity to understand the domestication process in Cicer spp. using SNP and DArT markers

2 October 2017

1 reference

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Genetic dissection of drought and heat tolerance in chickpea through genome-wide and candidate gene-based association mapping approaches

2 October 2017

1 reference

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A chromosomal genomics approach to assess and validate the desi and kabuli draft chickpea genome assemblies

2 October 2017

1 reference

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Integrated physical, genetic and genome map of chickpea (Cicer arietinum L.).

2 October 2017

1 reference

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Comprehensive transcriptome assembly of Chickpea (Cicer arietinum L.) using sanger and next generation sequencing platforms: development and applications

2 October 2017

1 reference

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PlantTFDB 3.0: a portal for the functional and evolutionary study of plant transcription factors.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4531285

Functionally relevant microsatellite markers from chickpea transcription factor genes for efficient genotyping applications and trait association mapping

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4531285

SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler

2 October 2017

1 reference

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A global view of transcriptome dynamics during flower development in chickpea by deep sequencing

2 October 2017

1 reference

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Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4531285

Comparative analysis of kabuli chickpea transcriptome with desi and wild chickpea provides a rich resource for development of functional markers

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4531285

High-throughput SNP discovery and genotyping for constructing a saturated linkage map of chickpea (Cicer arietinum L.).

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4531285

Large-scale development of cost-effective SNP marker assays for diversity assessment and genetic mapping in chickpea and comparative mapping in legumes

2 October 2017

1 reference

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NGS QC Toolkit: a toolkit for quality control of next generation sequencing data

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4531285

MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity

2 October 2017

1 reference

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Novel SSR markers from BAC-end sequences, DArT arrays and a comprehensive genetic map with 1,291 marker loci for chickpea (Cicer arietinum L.)

2 October 2017

1 reference

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The Medicago genome provides insight into the evolution of rhizobial symbioses

2 October 2017

1 reference

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Gene discovery and tissue-specific transcriptome analysis in chickpea with massively parallel pyrosequencing and web resource development.

2 October 2017

1 reference

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SyMAP v3.4: a turnkey synteny system with application to plant genomes

2 October 2017

1 reference

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De novo assembly of chickpea transcriptome using short reads for gene discovery and marker identification

2 October 2017

1 reference

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Integration of novel SSR and gene-based SNP marker loci in the chickpea genetic map and establishment of new anchor points with Medicago truncatula genome

2 October 2017

1 reference

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Genome sequence of the palaeopolyploid soybean

2 October 2017

1 reference

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A comprehensive resource of drought- and salinity- responsive ESTs for gene discovery and marker development in chickpea (Cicer arietinum L.).

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4531285

PRGdb: a bioinformatics platform for plant resistance gene analysis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4531285

Fast and accurate short read alignment with Burrows-Wheeler transform

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4531285

InterPro: the integrative protein signature database

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4531285

Automated eukaryotic gene structure annotation using EVidenceModeler and the Program to Assemble Spliced Alignments

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4531285

DNA transposons and the evolution of eukaryotic genomes

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4531285

PAML 4: phylogenetic analysis by maximum likelihood

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4531285

CEGMA: a pipeline to accurately annotate core genes in eukaryotic genomes

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4531285

Comprehensive analysis of alternative splicing in rice and comparative analyses with Arabidopsis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4531285

PAL2NAL: robust conversion of protein sequence alignments into the corresponding codon alignments

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4531285

Development of microsatellite markers and analysis of intraspecific genetic variability in chickpea (Cicer arietinum L.).

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4531285

Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4531285

De novo identification of repeat families in large genomes

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4531285

PILER: identification and classification of genomic repeats

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4531285

Gene prediction with a hidden Markov model and a new intron submodel

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4531285

Multiple sequence alignment with the Clustal series of programs

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4531285

The evolutionary fate and consequences of duplicate genes

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4531285

Ab initio gene finding in Drosophila genomic DNA

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4531285

Sequence-tagged microsatellite site markers for chickpea (Cicer arietinum L.).

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4531285

A reference genome for common bean and genome-wide analysis of dual domestications

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4531285

LTR_FINDER: an efficient tool for the prediction of full-length LTR retrotransposons

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4531285

A draft genome sequence of the pulse crop chickpea (Cicer arietinum L.).

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4531285

Placing paleopolyploidy in relation to taxon divergence: a phylogenetic analysis in legumes using 39 gene families

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4531285

The chickpea, summer cropping, and a new model for pulse domestication in the ancient near east

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4531285

The ATP-binding cassette transporters: structure, function, and gene family comparison between rice and Arabidopsis.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4531285

Transcriptome sequencing of wild chickpea as a rich resource for marker development

24 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26259924

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/SREP12806

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26259924%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26259924%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

PubMed publication ID

26259924

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26259924%20AND%20SRC:MED&resulttype=core&format=json