(Q35990251)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17804812%20AND%20SRC:MED&resulttype=core&format=json

5 January 2020

title

Configuration-dependent diffusion can shift the kinetic transition state and barrier height of protein folding (English)

1 reference

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5 January 2020

0 references

2

1 reference

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5 January 2020

author name string

Jorge Chahine

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17804812%20AND%20SRC:MED&resulttype=core&format=json

5 January 2020

Vitor B P Leite

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17804812%20AND%20SRC:MED&resulttype=core&format=json

5 January 2020

Jin Wang

series ordinal

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17804812%20AND%20SRC:MED&resulttype=core&format=json

5 January 2020

language of work or name

English

0 references

publication date

5 September 2007

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17804812%20AND%20SRC:MED&resulttype=core&format=json

Proceedings of the National Academy of Sciences of the United States of America

5 January 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17804812%20AND%20SRC:MED&resulttype=core&format=json

5 January 2020

volume

104

1 reference

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5 January 2020

issue

37

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17804812%20AND%20SRC:MED&resulttype=core&format=json

5 January 2020

page(s)

14646-14651

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17804812%20AND%20SRC:MED&resulttype=core&format=json

Ultrafast dynamics of protein collapse from single-molecule photon statistics.

5 January 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1976201

Sub-microsecond protein folding

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1976201

Kinetics are probe-dependent during downhill folding of an engineered lambda6-85 protein

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1976201

Probing the kinetics of single molecule protein folding

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1976201

The complex kinetics of protein folding in wide temperature ranges

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1976201

Folding lambda-repressor at its speed limit

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1976201

Variations in the fast folding rates of the lambda-repressor: a hybrid molecular dynamics study

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1976201

Diffusion and electrophoretic mobility of single-stranded RNA from molecular dynamics simulations.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1976201

How fast is protein hydrophobic collapse?

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1976201

Tuning the free-energy landscape of a WW domain by temperature, mutation, and truncation

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1976201

Probing the free-energy surface for protein folding with single-molecule fluorescence spectroscopy

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1976201

Observation of strange kinetics in protein folding

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1976201

Engineering of stable and fast-folding sequences of model proteins

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1976201

Funnels, pathways, and the energy landscape of protein folding: a synthesis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1976201

Submillisecond folding of monomeric lambda repressor

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1976201

Conformational substates in proteins

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1976201

The Energy Landscapes and Motions of Proteins

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1976201

Statistics of kinetic pathways on biased rough energy landscapes with applications to protein folding.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1976201

Structure and stability of monomeric lambda repressor: NMR evidence for two-state folding.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1976201

Topological and energetic factors: what determines the structural details of the transition state ensemble and "en-route" intermediates for protein folding? An investigation for small globular proteins

27 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606506104

Temperature dependence of the distribution of the first passage time: results from discontinuous molecular dynamics simulations of an all-atom model of the second beta-hairpin fragment of protein G.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606506104

Rate-temperature relationships in lambda-repressor fragment lambda 6-85 folding

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606506104

Cooperativity principles in protein folding.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606506104

Effective stochastic dynamics on a protein folding energy landscape

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1976201

The Activated Complex in Chemical Reactions

24 September 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606506104

The Structure of the Transition State for Folding of Chymotrypsin Inhibitor 2 Analysed by Protein Engineering Methods: Evidence for a Nucleation-condensation Mechanism for Protein Folding

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606506104

System-Size Dependence of Diffusion Coefficients and Viscosities from Molecular Dynamics Simulations with Periodic Boundary Conditions

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606506104

Position-dependent diffusion coefficients and free energies from Bayesian analysis of equilibrium and replica molecular dynamics simulations

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606506104

Diffusive Model of Protein Folding Dynamics with Kramers Turnover in Rate

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606506104

Energetic Components of Cooperative Protein Folding

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606506104

Folding at the speed limit

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606506104

Diffusion dynamics, moments, and distribution of first-passage time on the protein-folding energy landscape, with applications to single molecules

21 January 2018

1 reference

12 December 2020

Single-Molecule Measurement of Protein Folding Kinetics

1 reference

12 December 2020

Folding time predictions from all-atom replica exchange simulations

1 reference

12 December 2020

Specific and nonspecific collapse in protein folding funnels

1 reference

12 December 2020

Towards a consistent modeling of protein thermodynamic and kinetic cooperativity: how applicable is the transition state picture to folding and unfolding?

1 reference

12 December 2020

Variational transition-state theory for reaction rates in dissipative systems

1 reference

12 December 2020

Chain Length Scaling of Protein Folding Time

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.0606506104

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17804812%20AND%20SRC:MED&resulttype=core&format=json

5 January 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17804812%20AND%20SRC:MED&resulttype=core&format=json

5 January 2020

PubMed publication ID

17804812

1 reference