(Q36002971)

English

Sequence discrimination by DNA-binding domain of ETS family transcription factor PU.1 is linked to specific hydration of protein-DNA interface

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

11 August 2017

Sequence discrimination by DNA-binding domain of ETS family transcription factor PU.1 is linked to specific hydration of protein-DNA interface (English)

1 reference

Europe PubMed Central

PMC publication ID

11 August 2017

author name string

Gregory M K Poon

1

1 reference

Europe PubMed Central

PMC publication ID

11 August 2017

language of work or name

0 references

publication date

2 April 2012

1 reference

Europe PubMed Central

PMC publication ID

11 August 2017

Journal of Biological Chemistry

1 reference

Europe PubMed Central

PMC publication ID

11 August 2017

287

1 reference

Europe PubMed Central

PMC publication ID

11 August 2017

22

1 reference

Europe PubMed Central

PMC publication ID

11 August 2017

18297-18307

1 reference

Europe PubMed Central

PMC publication ID

11 August 2017

Genome-wide analysis of ETS-family DNA-binding in vitro and in vivo

1 reference

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2 October 2017

Stabilizing labile DNA-protein complexes in polyacrylamide gels

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365747

2 October 2017

DNA specificity determinants associate with distinct transcription factor functions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365747

2 October 2017

Genome-wide analyses reveal properties of redundant and specific promoter occupancy within the ETS gene family

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365747

2 October 2017

CAVER: a new tool to explore routes from protein clefts, pockets and cavities

1 reference

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2 October 2017

Expression profiles frame the promoter specificity dilemma of the ETS family of transcription factors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365747

2 October 2017

Conformations and dynamics of Ets-1 ETS domain-DNA complexes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365747

2 October 2017

Protein-solvent preferential interactions, protein hydration, and the modulation of biochemical reactions by solvent components

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365747

2 October 2017

Structural studies of Ets-1/Pax5 complex formation on DNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365747

2 October 2017

Mutants of ETS domain PU.1 and GGAA/T recognition: free energies and kinetics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365747

2 October 2017

DNA strand breaking by the hydroxyl radical is governed by the accessible surface areas of the hydrogen atoms of the DNA backbone

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365747

2 October 2017

The structure of GABPalpha/beta: an ETS domain- ankyrin repeat heterodimer bound to DNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365747

2 October 2017

Role of asymmetric phosphate neutralization in DNA bending by PU.1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365747

2 October 2017

The entropic penalty of ordered water accounts for weaker binding of the antibiotic novobiocin to a resistant mutant of DNA gyrase: a thermodynamic and crystallographic study

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365747

2 October 2017

Quantitative analysis of electrophoresis data: novel curve fitting methodology and its application to the determination of a protein-DNA binding constant

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365747

2 October 2017

Differences in water release for the binding of EcoRI to specific and nonspecific DNA sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365747

2 October 2017

New insights on DNA recognition by ets proteins from the crystal structure of the PU.1 ETS domain-DNA complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365747

2 October 2017

Characterization of the cooperative function of inhibitory sequences in Ets-1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365747

2 October 2017

A new pattern for helix-turn-helix recognition revealed by the PU.1 ETS-domain-DNA complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365747

2 October 2017

PU.1 is a component of a multiprotein complex which binds an essential site in the murine immunoglobulin lambda 2-4 enhancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365747

2 October 2017

Identification of ETS domain proteins in murine T lymphocytes that interact with the Moloney murine leukemia virus enhancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365747

2 October 2017

Stabilization of protein structure by sugars

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365747

2 October 2017

Hydroxyl radical "footprinting": high-resolution information about DNA-protein contacts and application to lambda repressor and Cro protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365747

2 October 2017

Interaction of murine ets-1 with GGA-binding sites establishes the ETS domain as a new DNA-binding motif

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365747

2 October 2017

Thermodynamic analysis of ion effects on the binding and conformational equilibria of proteins and nucleic acids: the roles of ion association or release, screening, and ion effects on water activity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365747

2 October 2017

Quantitative hydroxyl radical footprinting reveals cooperative interactions between DNA-binding subdomains of PU.1 and IRF4.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365747

11 July 2018

A three-protein-DNA complex on a B cell-specific domain of the immunoglobulin mu heavy chain gene enhancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365747

11 July 2018

Interpretation of monovalent and divalent cation effects on the lac repressor-operator interaction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365747

11 July 2018

DNA binding specificity studies of four ETS proteins support an indirect read-out mechanism of protein-DNA recognition.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.342345

21 January 2018

Base Coupling in Sequence-specific Site Recognition by the ETS Domain of Murine PU.1

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.342345

21 January 2018

A thermodynamic basis of DNA sequence selectivity by the ETS domain of murine PU.1.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.342345

21 January 2018

Sequence specific DNA binding of Ets-1 transcription factor: molecular dynamics study on the Ets domain--DNA complexes

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.342345

21 January 2018

The sequence-specific association of the ETS domain of murine PU.1 with DNA exhibits unusual energetics

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https://api.crossref.org/works/10.1074%2FJBC.M112.342345

21 January 2018

A practical guide on how osmolytes modulate macromolecular properties.

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21 January 2018

Preferential interactions of proteins with solvent components in aqueous amino acid solutions.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.342345

21 January 2018

Hydroxyl Radical Footprinting of DNA Complexes of the Ets Domain of PU.1 and Its Comparison to the Crystal Structure†

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.342345

21 January 2018

Critical flanking sequences of PU.1 binding sites in myeloid-specific promoters

1 reference

https://pubmed.ncbi.nlm.nih.gov/22474303

12 December 2020

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Vapor pressure osmometry studies of osmolyte-protein interactions: implications for the action of osmoprotectants in vivo and for the interpretation of "osmotic stress" experiments in vitro

1 reference

https://pubmed.ncbi.nlm.nih.gov/22474303

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The unusual conformation adopted by the adenine tracts in kinetoplast DNA

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https://pubmed.ncbi.nlm.nih.gov/22474303

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Self-association of nicotinamide in aqueous solution: light-scattering and vapor pressure osmometry studies

1 reference

https://pubmed.ncbi.nlm.nih.gov/22474303

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DNA binding by the ETS domain

1 reference

https://pubmed.ncbi.nlm.nih.gov/22474303

12 December 2020

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Backbone dynamics of a short PU.1 ETS domain

1 reference

https://pubmed.ncbi.nlm.nih.gov/22474303

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1074/JBC.M112.342345

1 reference

Europe PubMed Central

PMC publication ID

11 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

11 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

11 August 2017

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