(Q36011766)

11 August 2017

Complete genome sequence of the halophilic and highly halotolerant Chromohalobacter salexigens type strain (1H11(T)). (English)

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11 August 2017

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whole genome sequencing

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Alla Lapidus

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Hans-Peter Klenk

27

Hans-Peter Klenk

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Tijana Glavina Del Rio

7

Tijana Glavina Del Rio

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Roxanne Tapia

15

Roxanne Tapia

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Tanja Woyke

29

Tanja Woyke

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Carmen Vargas

Carmen Vargas

22

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Joaquín J. Nieto

Joaquin J Nieto

23

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Sam Pitluck

11

Sam Pitluck

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11 August 2017

13

Lynne Goodwin

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11 August 2017

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Loren Hauser

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11 August 2017

3

Susan Lucas

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11 August 2017

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Hope Tice

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11 August 2017

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John C Detter

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11 August 2017

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Alex Copeland

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11 August 2017

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David Bruce

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11 August 2017

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Nancy Hammon

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11 August 2017

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Cliff Han

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11 August 2017

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Eileen Dalin

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11 August 2017

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Kerrie W Berry

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11 August 2017

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Jeremy Schmutz

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11 August 2017

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Frank Larimer

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11 August 2017

Kathleen O'Connor

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11 August 2017

Elizabeth Saunders

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11 August 2017

Thomas Brettin

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11 August 2017

Laszlo N Csonka

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11 August 2017

30 December 2011

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Standards in genomic sciences

11 August 2017

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5

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11 August 2017

379-388

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https://scigraph.springernature.com/pub.10.4056/sigs.2285059

11 August 2017

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cites work

Complete genome sequence of Kytococcus sedentarius type strain (541).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368415

Genome-scale reconstruction of metabolic network for a halophilic extremophile, Chromohalobacter salexigens DSM 3043

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368415

A blueprint of ectoine metabolism from the genome of the industrial producer Halomonas elongata DSM 2581 T.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368415

Ectoines in cell stress protection: uses and biotechnological production.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368415

Isethionate formation from taurine in Chromohalobacter salexigens: purification of sulfoacetaldehyde reductase

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368415

The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368415

A rapid bootstrap algorithm for the RAxML Web servers

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368415

The minimum information about a genome sequence (MIGS) specification

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368415

Modicisalibacter tunisiensis gen. nov., sp. nov., an aerobic, moderately halophilic bacterium isolated from an oilfield-water injection sample, and emended description of the family Halomonadaceae Franzmann et al. 1989 emend Dobson and Franzmann 199

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368415

Halotalea alkalilenta gen. nov., sp. nov., a novel osmotolerant and alkalitolerant bacterium from alkaline olive mill wastes, and emended description of the family Halomonadaceae Franzmann et al. 1989, emend. Dobson and Franzmann 1996.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368415

Identifying bacterial genes and endosymbiont DNA with Glimmer

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368415

Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368415

Improved prediction of signal peptides: SignalP 3.0

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368415

The High Salt Requirement of the Moderate Halophile Chromohalobacter salexigens DSM3043 Can Be Met Not Only by NaCl but by Other Ions

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368415

Multiple sequence alignment using partial order graphs

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368415

Chromohalobacter salexigens sp. nov., a moderately halophilic species that includes Halomonas elongata DSM 3043 and ATCC 33174.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368415

Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368415

Gene ontology: tool for the unification of biology

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368415

Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368415

CRITICA: coding region identification tool invoking comparative analysis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368415

Synthesis of glycine betaine from exogenous choline in the moderately halophilic bacterium halomonas elongata

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368415

List of Bacterial Names with Standing in Nomenclature: a folder available on the Internet

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368415

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368415

Osmoprotectants in Halomonas elongata: high-affinity betaine transport system and choline-betaine pathway

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368415

Basic local alignment search tool

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368415

Genetic analysis of tag mutants of Myxococcus xanthus provides evidence for two developmental aggregation systems

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368415

Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368415

How many bootstrap replicates are necessary?

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368415

How to be moderately halophilic with broad salt tolerance: clues from the genome of Chromohalobacter salexigens

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368415

Complex regulation of the synthesis of the compatible solute ectoine in the halophilic bacterium Chromohalobacter salexigens DSM 3043T.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368415

Transfer of Halomonas canadensis and Halomonas israelensis to the genus Chromohalobacter as Chromohalobacter canadensis comb. nov. and Chromohalobacter israelensis comb. nov..

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368415

Classification of "Chromobacterium marismortui" in a New Genus, Chromohalobacter gen. nov., as Chromohalobacter marismortui comb. nov., nom. rev.

23 September 2018

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.2285059

Halomonas elongata, a New Genus and Species of Extremely Salt-Tolerant Bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.2285059

Validation List no. 106: Validation of publication of new names and new combinations previously effectively published outside the IJSEM

21 January 2018

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.2285059

Halomonadaceae fam. nov., a New Family of the Class Proteobacteria to Accommodate the Genera Halomonas and Deleya

21 January 2018

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.2285059

Unification of the Genera Deleya (Baumann et al. 1983), Halomonas (Vreeland et al. 1980), and Halovibrio (Fendrich 1988) and the Species Paracoccus halodenitrificans (Robinson and Gibbons 1952) into a Single Genus, Halomonas, and Placement of the ...

21 January 2018

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.2285059

21 January 2018

Identifiers

DOI

10.4056/SIGS.2285059

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Dimensions Publication ID

11 August 2017

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11 August 2017

PubMed publication ID

22675587

1 reference