(Q36017446)

11 August 2017

1 reference

title

Protein structural transitions and their functional role (English)

1 reference

11 August 2017

1

Martin Karplus

1 reference

11 August 2017

Yi Qin Gao

2

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11 August 2017

Jianpeng Ma

series ordinal

3

1 reference

11 August 2017

Arjan van der Vaart

series ordinal

4

1 reference

11 August 2017

Wei Yang

series ordinal

5

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11 August 2017

language of work or name

English

0 references

publication date

1 February 2005

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Philosophical Transactions of the Royal Society A

11 August 2017

published in

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11 August 2017

volume

363

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11 August 2017

issue

1827

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11 August 2017

page(s)

331-55; discussion 355-6

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F1-ATPase is a highly efficient molecular motor that rotates with discrete 120 degree steps

11 August 2017

cites work

1 reference

11 October 2022

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The rotary motor of bacterial flagella

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11 October 2022

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GroEL-GroES cycling: ATP and nonnative polypeptide direct alternation of folding-active rings

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11 October 2022

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The energy landscape as a unifying theme in molecular science

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11 October 2022

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Viscoelastic dynamics of actin filaments coupled to rotary F-ATPase: angular torque profile of the enzyme

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Mechanics of coupling proton movements to c-ring rotation in ATP synthase

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11 October 2022

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Structure of bovine mitochondrial F(1)-ATPase with nucleotide bound to all three catalytic sites: implications for the mechanism of rotary catalysis

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

A thermodynamic coupling mechanism for GroEL-mediated unfolding

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Solution structure of the transmembrane H+-transporting subunit c of the F1F0 ATP synthase

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Review: a structural view of the GroE chaperone cycle

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Conformational dynamics of the F1-ATPase beta-subunit: a molecular dynamics study

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Multivalent binding of nonnative substrate proteins by the chaperonin GroEL.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Membrane tube formation from giant vesicles by dynamic association of motor proteins

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Significant hydrogen exchange protection in GroEL-bound DHFR is maintained during iterative rounds of substrate cycling

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Dynamics of ligand binding to myoglobin

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Chemomechanical coupling in F1-ATPase revealed by simultaneous observation of nucleotide kinetics and rotation

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Structural changes linked to proton translocation by subunit c of the ATP synthase

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

The missing link between thermodynamics and structure in F1-ATPase

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

A model for the cooperative free energy transduction and kinetics of ATP hydrolysis by F 1 -ATPase

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Structure at 2.8 A resolution of F1-ATPase from bovine heart mitochondria

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Identification of in vivo substrates of the chaperonin GroEL

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Dynamics of folded proteins

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Catalysis and rotation of F1 motor: cleavage of ATP at the catalytic site occurs in 1 ms before 40 degree substep rotation

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

The crystal structure of a GroEL/peptide complex: plasticity as a basis for substrate diversity

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Elastic energy storage in beta-sheets with application to F1-ATPase

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Getting a grip on how DNA polymerases function

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Mechanically driven ATP synthesis by F1-ATPase

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Distinct actions of cis and trans ATP within the double ring of the chaperonin GroEL.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Residues in chaperonin GroEL required for polypeptide binding and release

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Dynamics of the chaperonin ATPase cycle: implications for facilitated protein folding

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Location of a folding protein and shape changes in GroEL-GroES complexes imaged by cryo-electron microscopy.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

ATP-bound states of GroEL captured by cryo-electron microscopy

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Annealing function of GroEL: structural and bioinformatic analysis.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Exploring the kinetic requirements for enhancement of protein folding rates in the GroEL cavity

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Interactions among γR268, γQ269, and the β Subunit Catch Loop of Escherichia coli F1-ATPase Are Important for Catalytic Activity

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Chaperonin function: folding by forced unfolding

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Structural basis for GroEL-assisted protein folding from the crystal structure of (GroEL-KMgATP)14 at 2.0A resolution

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Energy landscapes and solved protein-folding problems.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Characterization of the active intermediate of a GroEL-GroES-mediated protein folding reaction

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Allostery and protein substrate conformational change during GroEL/GroES-mediated protein folding

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Towards complete descriptions of the free-energy landscapes of proteins

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Simulations of chaperone-assisted folding.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Conformational states bound by the molecular chaperones GroEL and secB: a hidden unfolding (annealing) activity

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Biomolecular motors: the F1-ATPase paradigm

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

The allosteric mechanism of the chaperonin GroEL: a dynamic analysis

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Chaperonin-facilitated protein folding: optimization of rate and yield by an iterative annealing mechanism

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

A research journey with ATP synthase

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Multiple conformational states of proteins: a molecular dynamics analysis of myoglobin

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Chaperonin-mediated protein folding

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

The ATP synthase--a splendid molecular machine

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

The crystal structure of the asymmetric GroEL-GroES-(ADP)7 chaperonin complex

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Mechanism of the F(1)F(0)-type ATP synthase, a biological rotary motor

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Principles that govern the folding of protein chains

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Resolution of distinct rotational substeps by submillisecond kinetic analysis of F1-ATPase

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Conformational changes in the GroEL oligomer during the functional cycle.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Rotary protein motors

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

The cell as a collection of protein machines: preparing the next generation of molecular biologists

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

A dynamic analysis of the rotation mechanism for conformational change in F(1)-ATPase

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Catalysis of amide proton exchange by the molecular chaperones GroEL and SecB

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Molecular chaperones in cellular protein folding

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Temperature-dependent X-ray diffraction as a probe of protein structural dynamics

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

The chaperonin ATPase cycle: mechanism of allosteric switching and movements of substrate-binding domains in GroEL.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Dual Function of Protein Confinement in Chaperonin-Assisted Protein Folding

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

GroEL-mediated protein folding proceeds by multiple rounds of binding and release of nonnative forms

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Direct observation of the rotation of F1-ATPase

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

CHARMM: A program for macromolecular energy, minimization, and dynamics calculations

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Conformational variability in the refined structure of the chaperonin GroEL at 2.8 A resolution

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Protein substrate binding induces conformational changes in the chaperonin GroEL. A suggested mechanism for unfoldase activity

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Catalytic sites of Escherichia coli F1-ATPase

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Principles of protein folding in the cellular environment

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Catalytic mechanism of F1-ATPase

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Folding of malate dehydrogenase inside the GroEL-GroES cavity

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

The crystal structure of the bacterial chaperonin GroEL at 2.8 A

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

The structure of the central stalk in bovine F(1)-ATPase at 2.4 A resolution

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Asymmetry in the F1-ATPase and its implications for the rotational cycle

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Nucleotide binding to the chaperonin GroEL: non-cooperative binding of ATP analogs and ADP, and cooperative effect of ATP.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

The molecular mechanism of ATP synthesis by F1F0-ATP synthase

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

A normal mode analysis of structural plasticity in the biomolecular motor F(1)-ATPase

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

The unbinding of ATP from F1-ATPase

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Fourteen Protomers Compose the Oligomer III of the Proton-rotor in Spinach Chloroplast ATP Synthase

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

A structural model for GroEL-polypeptide recognition

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

GroEL/GroES-mediated folding of a protein too large to be encapsulated

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

A dynamic model for the allosteric mechanism of GroEL

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

The unfolding action of GroEL on a protein substrate

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

The binding change mechanism for ATP synthase--some probabilities and possibilities

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Kinetic modeling of rotary CF0F1-ATP synthase: storage of elastic energy during energy transduction

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Structure of the mitochondrial ATP synthase by electron cryomicroscopy

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Protein compactness measured by fluorescence resonance energy transfer. Human carbonic anhydrase ii is considerably expanded by the interaction of GroEL.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

The 2.4 A crystal structure of the bacterial chaperonin GroEL complexed with ATP gamma S

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Equilibrium and kinetics of the allosteric transition of GroEL studied by solution X-ray scattering and fluorescence spectroscopy

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Energy transduction in the F1 motor of ATP synthase

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Proton-powered subunit rotation in single membrane-bound F0F1-ATP synthase.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1098/RSTA.2004.1496

Identifiers

DOI

10.1098/RSTA.2004.1496

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11 August 2017

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