(Q36049555)

11 August 2017

Reshaping of global gene expression networks and sex-biased gene expression by integration of a young gene (English)

1 reference

Rcd-1 related Dmel_CG9573

11 August 2017

1 reference

GOA release 2020-03-11

5

Maria D Vibranovski

1 reference

11 August 2017

7

Manyuan Long

1 reference

11 August 2017

Sidi Chen

1

1 reference

11 August 2017

Xiaochun Ni

2

1 reference

11 August 2017

Benjamin H Krinsky

3

1 reference

11 August 2017

Yong E Zhang

4

1 reference

11 August 2017

Kevin P White

6

1 reference

11 August 2017

language of work or name

English

0 references

publication date

27 April 2012

1 reference

11 August 2017

1 reference

11 August 2017

31

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11 August 2017

12

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11 August 2017

2798-2809

1 reference

describes a project that uses

11 August 2017

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC3380208/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

limma

1 reference

22 June 2022

https://europepmc.org/article/PMC/3380208

based on heuristic

inferred from PubMed Central ID database lookup

cites work

Frequent recent origination of brain genes shaped the evolution of foraging behavior in Drosophila

1 reference

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A cis-regulatory map of the Drosophila genome.

2 October 2017

1 reference

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A young Drosophila duplicate gene plays essential roles in spermatogenesis by regulating several Y-linked male fertility genes

2 October 2017

1 reference

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Identification of functional elements and regulatory circuits by Drosophila modENCODE

2 October 2017

1 reference

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New genes in Drosophila quickly become essential

2 October 2017

1 reference

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Analyses of nuclearly encoded mitochondrial genes suggest gene duplication as a mechanism for resolving intralocus sexually antagonistic conflict in Drosophila

2 October 2017

1 reference

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Age-dependent chromosomal distribution of male-biased genes in Drosophila

2 October 2017

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2 October 2017

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Origins, evolution, and phenotypic impact of new genes.

2 October 2017

1 reference

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Stage-specific expression profiling of Drosophila spermatogenesis suggests that meiotic sex chromosome inactivation drives genomic relocation of testis-expressed genes

2 October 2017

1 reference

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A Drosophila resource of transgenic RNAi lines for neurogenetics

2 October 2017

1 reference

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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3380208

General gene movement off the X chromosome in the Drosophila genus

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3380208

RNA-based gene duplication: mechanistic and evolutionary insights

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3380208

The UCSC Genome Browser Database: update 2009

2 October 2017

1 reference

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An integrated software system for analyzing ChIP-chip and ChIP-seq data

2 October 2017

1 reference

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Discovering novel sequence motifs with MEME.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3380208

RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3380208

Birth and rapid subcellular adaptation of a hominoid-specific CDC14 protein

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3380208

Mapping and quantifying mammalian transcriptomes by RNA-Seq

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3380208

Positive and negative selection on noncoding DNA in Drosophila simulans

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3380208

The evolution of courtship behaviors through the origination of a new gene in Drosophila

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3380208

Functional diversification of duplicate genes through subcellular adaptation of encoded proteins

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3380208

Demasculinization of X chromosomes in the Drosophila genus

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3380208

Global analysis of patterns of gene expression during Drosophila embryogenesis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3380208

A genome-wide transgenic RNAi library for conditional gene inactivation in Drosophila

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3380208

Using FlyAtlas to identify better Drosophila melanogaster models of human disease

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3380208

PAML 4: phylogenetic analysis by maximum likelihood

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3380208

Comparative genomics reveals a constant rate of origination and convergent acquisition of functional retrogenes in Drosophila

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3380208

Atomic model of human Rcd-1 reveals anarmadillo-like-repeat protein with in vitro nucleic acid binding properties

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3380208

The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3380208

Evolving protein functional diversity in new genes of Drosophila

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3380208

2 October 2017

Biological robustness

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3380208

Birth and adaptive evolution of a hominoid gene that supports high neurotransmitter flux

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3380208

The cytoplasmic body component TRIM5alpha restricts HIV-1 infection in Old World monkeys

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3380208

DnaSP, DNA polymorphism analyses by the coalescent and other methods

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3380208

The origin of new genes: glimpses from the young and old

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3380208

Systematic determination of patterns of gene expression during Drosophila embryogenesis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3380208

Mammalian Rcd1 is a novel transcriptional cofactor that mediates retinoic acid-induced cell differentiation

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3380208

Purification and characterization of the 1.0 MDa CCR4-NOT complex identifies two novel components of the complex

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3380208

SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3380208

Novel factor highly conserved among eukaryotes controls sexual development in fission yeast

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3380208

PAML: a program package for phylogenetic analysis by maximum likelihood

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3380208

Using CLUSTAL for multiple sequence alignments

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3380208

Toward a molecular genetic analysis of spermatogenesis in Drosophila melanogaster: characterization of male-sterile mutants generated by single P element mutagenesis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3380208

Evolution of a novel phenolic pathway for pollen development

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3380208

Estimating the rate of adaptive molecular evolution in the presence of slightly deleterious mutations and population size change

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3380208

The NOT proteins are part of the CCR4 transcriptional complex and affect gene expression both positively and negatively

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3380208

The genomic rate of adaptive amino acid substitution in Drosophila.

11 July 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2012.108

Natural selection shapes genome-wide patterns of copy-number polymorphism in Drosophila melanogaster.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2012.108

Sebida: a database for the functional and evolutionary analysis of genes with sex-biased expression.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2012.108

GETDB, a database compiling expression patterns and molecular locations of a collection of Gal4 enhancer traps.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2012.108

Evolution of eukaryotic transcription circuits

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2012.108

Parallel adaptive origins of digestive RNases in Asian and African leaf monkeys

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2012.108

Rapid evolution of genomic Acp complement in the melanogaster subgroup of Drosophila

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2012.108

21 January 2018

Identifiers

DOI

10.1038/EMBOJ.2012.108

1 reference

11 August 2017

1 reference

11 August 2017

PubMed publication ID

22543869

1 reference