(Q36070917)

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Genome sequence of the moderately thermophilic, amino-acid-degrading and sulfur-reducing bacterium Thermovirga lienii type strain (Cas60314(T)).

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Europe PubMed Central

PMC publication ID

12 August 2017

Genome sequence of the moderately thermophilic, amino-acid-degrading and sulfur-reducing bacterium Thermovirga lienii type strain (Cas60314(T)). (English)

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Europe PubMed Central

PMC publication ID

12 August 2017

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based on heuristic

inferred from title

Thermovirga lienii

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Thermovirga lienii

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based on heuristic

inferred from title

1

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12 August 2017

Natalia N. Ivanova

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Jonathan A. Eisen

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Nikos C. Kyrpides

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12 August 2017

3

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Alla Lapidus

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Evelyne-Marie Brambilla

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Evelyne-Marie Brambilla

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Hans-Peter Klenk

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Hans-Peter Klenk

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Philip Hugenholtz

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Philip Hugenholtz

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Tanja Woyke

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Cliff Han

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Sam Pitluck

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Victor Markowitz

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Victor Markowitz

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Amrita Pati

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Jan-Fang Cheng

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Konstantinos Mavromatis

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Konstantinos Mavromatis

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Krishna Palaniappan

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Krishna Palaniappan

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Matt Nolan

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Susan Lucas

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Amy Chen

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Cynthia D Jeffries

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Cynthia D Jeffries

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John C Detter

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Ioanna Pagani

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Yun-Juan Chang

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Shweta Deshpande

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Shweta Deshpande

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Konstantinos Liolios

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Konstantinos Liolios

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James Bristow

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Lynne A. Goodwin

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Lynne A Goodwin

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Natalia Mikhailova

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Natalia Mikhailova

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author name string

Elisabeth Saunders

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12 August 2017

publication date

4 May 2012

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12 August 2017

Standards in genomic sciences

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230-239

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The DNA bank network: the start from a german initiative

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2 October 2017

Non-contiguous finished genome sequence of Aminomonas paucivorans type strain (GLU-3).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3387794

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Complete genome sequence of Aminobacterium colombiense type strain (ALA-1).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3387794

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Permanent draft genome sequence of Dethiosulfovibrio peptidovorans type strain (SEBR 4207)

1 reference

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2 October 2017

Complete genome sequence of Thermanaerovibrio acidaminovorans type strain (Su883).

1 reference

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2 October 2017

En route to a genome-based classification of Archaea and Bacteria?

1 reference

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Prodigal: prokaryotic gene recognition and translation initiation site identification

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A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea

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The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata

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A rapid bootstrap algorithm for the RAxML Web servers

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2 October 2017

The minimum information about a genome sequence (MIGS) specification

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3387794

2 October 2017

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

1 reference

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2 October 2017

RNAmmer: consistent and rapid annotation of ribosomal RNA genes

1 reference

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2 October 2017

Thermovirga lienii gen. nov., sp. nov., a novel moderately thermophilic, anaerobic, amino-acid-degrading bacterium isolated from a North Sea oil well

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3387794

2 October 2017

Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB

1 reference

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Improved prediction of signal peptides: SignalP 3.0

1 reference

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Rfam: an RNA family database

1 reference

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2 October 2017

Multiple sequence alignment using partial order graphs

1 reference

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Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes

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Gene ontology: tool for the unification of biology

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2 October 2017

Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis

1 reference

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2 October 2017

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

2 references

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21 January 2018

Basic local alignment search tool

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2 October 2017

Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya

1 reference

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2 October 2017

Description of 'Synergistetes' phyl. nov. and emended description of the phylum 'Deferribacteres' and of the family Syntrophomonadaceae, phylum 'Firmicutes'

1 reference

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21 January 2018

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21 January 2018

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10.4056/SIGS.2726028

1 reference

Europe PubMed Central

PMC publication ID

12 August 2017

Dimensions Publication ID

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1 reference

Europe PubMed Central

PMC publication ID

12 August 2017

PubMed publication ID

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Europe PubMed Central

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12 August 2017

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