(Q36109023)

English

Cross-linking measurements of the Potato leafroll virus reveal protein interaction topologies required for virion stability, aphid transmission, and virus-plant interactions

scientific article

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scholarly article

1 reference

Europe PubMed Central

12 August 2017

Cross-linking measurements of the Potato leafroll virus reveal protein interaction topologies required for virion stability, aphid transmission, and virus-plant interactions (English)

1 reference

Europe PubMed Central

12 August 2017

1 reference

based on heuristic

inferred from title

Potato leafroll virus

object named as

Potato leafroll virus

1 reference

based on heuristic

inferred from title

5

object named as

Jimmy K Eng

1 reference

Europe PubMed Central

12 August 2017

author name string

Juan D Chavez

1

1 reference

Europe PubMed Central

12 August 2017

Michelle Cilia

2

1 reference

Europe PubMed Central

12 August 2017

Chad R Weisbrod

3

1 reference

Europe PubMed Central

12 August 2017

Ho-Jong Ju

4

1 reference

Europe PubMed Central

12 August 2017

Stewart M Gray

6

1 reference

Europe PubMed Central

12 August 2017

James E Bruce

7

1 reference

Europe PubMed Central

12 August 2017

publication date

30 March 2012

1 reference

Europe PubMed Central

12 August 2017

Journal of Proteome Research

1 reference

Europe PubMed Central

12 August 2017

11

1 reference

Europe PubMed Central

12 August 2017

5

1 reference

Europe PubMed Central

12 August 2017

2968-2981

1 reference

Europe PubMed Central

12 August 2017

Modern biomolecular mass spectrometry and its role in studying virus structure, dynamics, and assembly.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402239

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Discrete fracture patterns of virus shells reveal mechanical building blocks

1 reference

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2 October 2017

Cross-linking measurements of in vivo protein complex topologies

1 reference

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Genetics coupled to quantitative intact proteomics links heritable aphid and endosymbiont protein expression to circulative polerovirus transmission

1 reference

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A new cross-linking strategy: protein interaction reporter (PIR) technology for protein-protein interaction studies

1 reference

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A photocleavable and mass spectrometry identifiable cross-linker for protein interaction studies

1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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Insect vector interactions with persistently transmitted viruses

1 reference

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I-TASSER server for protein 3D structure prediction

1 reference

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1 reference

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1 reference

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Informatics strategies for large-scale novel cross-linking analysis

1 reference

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1 reference

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1 reference

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2 October 2017

Protein database searches using compositionally adjusted substitution matrices

1 reference

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1 reference

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2 October 2017

IUPred: web server for the prediction of intrinsically unstructured regions of proteins based on estimated energy content

1 reference

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2 October 2017

A surface loop of the potato leafroll virus coat protein is involved in virion assembly, systemic movement, and aphid transmission

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402239

2 October 2017

Structure of small viruses

1 reference

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2 October 2017

Luteovirus-aphid interactions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402239

2 October 2017

Effects of point mutations in the major capsid protein of beet western yellows virus on capsid formation, virus accumulation, and aphid transmission

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402239

2 October 2017

The multifunctional capsid proteins of plant RNA viruses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402239

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3D domain swapping modulates the stability of members of an icosahedral virus group

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402239

2 October 2017

Identifying the determinants in the equatorial domain of Buchnera GroEL implicated in binding Potato leafroll virus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402239

2 October 2017

Effects of point mutations in the readthrough domain of the beet western yellows virus minor capsid protein on virus accumulation in planta and on transmission by aphids

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402239

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Probability-based protein identification by searching sequence databases using mass spectrometry data

1 reference

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

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2 October 2017

Aphid transmission of beet western yellows luteovirus requires the minor capsid read-through protein P74.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402239

2 October 2017

The C terminus of the polerovirus p5 readthrough domain limits virus infection to the phloem

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402239

2 July 2018

Aphid Acquisition and Cellular Transport of Potato leafroll virus-like Particles Lacking P5 Readthrough Protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402239

2 July 2018

Role of accessory salivary glands in aphid transmission of barley yellow dwarf virus.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402239

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1 reference

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Studies on the role of the minor capsid protein in transport of Beet western yellows virus through Myzus persicae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402239

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Effects of mutations in the beet western yellows virus readthrough protein on its expression and packaging and on virus accumulation, symptoms, and aphid transmission

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402239

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Ultrastructural study of acquisition and retention of potato leafroll luteovirus in the alimentary canal of its aphid vector, Myzus persicae Sulz.

1 reference

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Aphid transmission and systemic plant infection determinants of barley yellow dwarf luteovirus-PAV are contained in the coat protein readthrough domain and 17-kDa protein, respectively

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402239

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Identification of beet western yellows luteovirus genes implicated in viral replication and particle morphogenesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402239

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In vivo expression and mutational analysis of the barley yellow dwarf virus readthrough gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402239

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Readthrough protein associated with virions of barley yellow dwarf luteovirus and its potential role in regulating the efficiency of aphid transmission

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402239

2 July 2018

Analysis of epitopes on potato leafroll virus capsid protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402239

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402239

23 September 2018

Interrogating viral capsid assembly with ion mobility-mass spectrometry

1 reference

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Genetic Regulation of Polerovirus and Luteovirus Transmission in the Aphid Schizaphis graminum.

1 reference

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1 reference

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Small deletions in the potato leafroll virus readthrough protein affect particle morphology, aphid transmission, virus movement and accumulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402239

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Barley yellow dwarf virus: phenotypic mixing and vector specificity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402239

23 September 2018

Point mutations in the potato leafroll virus major capsid protein alter virion stability and aphid transmission

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402239

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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Endosymbiotic bacteria associated with circulative transmission of potato leafroll virus by Myzus persicae

1 reference

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1 reference

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Phylogeny of capsid proteins of small icosahedral RNA plant viruses

1 reference

https://pubmed.ncbi.nlm.nih.gov/22390342

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mass spectrometry identifiable cross-linking strategy for studying protein-protein interactions

1 reference

https://pubmed.ncbi.nlm.nih.gov/22390342

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1021/PR300041T

1 reference

Europe PubMed Central

12 August 2017

1 reference

Europe PubMed Central

12 August 2017

1 reference

Europe PubMed Central

12 August 2017

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