(Q36150437)

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Topologies, structures and parameter files for lipid simulations in GROMACS with the OPLS-aa force field: DPPC, POPC, DOPC, PEPC, and cholesterol

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scholarly article

1 reference

Europe PubMed Central

12 August 2017

Topologies, structures and parameter files for lipid simulations in GROMACS with the OPLS-aa force field: DPPC, POPC, DOPC, PEPC, and cholesterol (English)

1 reference

Europe PubMed Central

12 August 2017

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object named as

Waldemar Kulig

1

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Marta Pasenkiewicz-Gierula

object named as

Marta Pasenkiewicz-Gierula

2

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Tomasz Róg

3

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publication date

26 September 2015

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Europe PubMed Central

12 August 2017

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Europe PubMed Central

12 August 2017

5

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Europe PubMed Central

12 August 2017

333-336

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Europe PubMed Central

12 August 2017

maintained by WikiProject

WikiProject Software

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GROMACS 4: Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4602361

2 October 2017

Improved Peptide and Protein Torsional Energetics with the OPLSAA Force Field

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4602361

2 October 2017

Cholesterol, sphingolipids, and glycolipids: what do we know about their role in raft-like membranes?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4602361

2 October 2017

Lipid14: The Amber Lipid Force Field.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4602361

2 October 2017

Update of the CHARMM all-atom additive force field for lipids: validation on six lipid types

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4602361

2 October 2017

Refined OPLS all-atom force field for saturated phosphatidylcholine bilayers at full hydration

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4602361

23 September 2018

Update of the cholesterol force field parameters in CHARMM.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4602361

23 September 2018

Cis and trans unsaturated phosphatidylcholine bilayers: A molecular dynamics simulation study

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4602361

5 December 2018

CHARMM-GUI: a web-based graphical user interface for CHARMM

1 reference

https://pubmed.ncbi.nlm.nih.gov/26568975

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An ab Initio Study on the Torsional Surface of Alkanes and Its Effect on Molecular Simulations of Alkanes and a DPPC Bilayer

1 reference

https://pubmed.ncbi.nlm.nih.gov/26568975

12 December 2020

based on heuristic

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Identifiers

10.1016/J.DIB.2015.09.013

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Europe PubMed Central

12 August 2017

1 reference

Europe PubMed Central

12 August 2017

1 reference

Europe PubMed Central

12 August 2017

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