(Q36153923)

12 August 2017

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title

Lessons from the genomes of bifidobacteria (English)

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12 August 2017

Adrianne Klijn

1

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12 August 2017

Annick Mercenier

series ordinal

2

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12 August 2017

Fabrizio Arigoni

series ordinal

3

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12 August 2017

publication date

1 August 2005

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FEMS Microbiology Reviews

12 August 2017

published in

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12 August 2017

volume

29

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12 August 2017

issue

3

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12 August 2017

page(s)

491-509

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Bifidobacterium inopinatum sp. nov. and Bifidobacterium denticolens sp. nov., two new species isolated from human dental caries

12 August 2017

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21 January 2018

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Phylogenetic analysis of the genus Bifidobacterium and related genera based on 16S rDNA sequences

21 January 2018

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Evaluation of the rrn operon copy number in Bifidobacterium using real-time PCR.

21 January 2018

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Evaluation of using a short region of the recA gene for rapid and sensitive speciation of dominant bifidobacteria in the human large intestine

21 January 2018

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New approach to phylogenetic analysis of the genus Bifidobacterium based on partial HSP60 gene sequences

21 January 2018

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Characterization of the groEL and groES loci in Bifidobacterium breve UCC 2003: genetic, transcriptional, and phylogenetic analyses

21 January 2018

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Gene structure and transcriptional organization of the dnaK operon of Bifidobacterium breve UCC 2003 and application of the operon in bifidobacterial tracing

21 January 2018

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Analysis of intestinal flora development in breast-fed and formula-fed infants by using molecular identification and detection methods

21 January 2018

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Quantification of Bifidobacterium spp., Escherichia coli and Clostridium difficile in faecal samples of breast-fed and formula-fed infants by real-time PCR.

21 January 2018

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Use of 16S rRNA gene-targeted group-specific primers for real-time PCR analysis of predominant bacteria in human feces

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Age and disease related changes in intestinal bacterial populations assessed by cell culture, 16S rRNA abundance, and community cellular fatty acid profiles

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Comparison of compositions and metabolic activities of fecal microbiotas in young adults and in antibiotic-treated and non-antibiotic-treated elderly subjects

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Gut changes attributed to ageing: effects on intestinal microflora

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Alterations of the dominant faecal bacterial groups in patients with Crohn's disease of the colon

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Complete genome sequence of Lactobacillus plantarum WCFS1

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Identification and antibiotic susceptibility of bacterial isolates from probiotic products

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Effect of a probiotic formula on intestinal immunoglobulin A production in healthy children

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Microbiological effects of consuming a synbiotic containing Bifidobacterium bifidum, Bifidobacterium lactis, and oligofructose in elderly persons, determined by real-time polymerase chain reaction and counting of viable bacteria.

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Stimulation of the secretion of pro-inflammatory cytokines by Bifidobacterium strains.

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Modulation of human dendritic cell phenotype and function by probiotic bacteria

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Effect of Bifidobacterium longum ingestion on experimental salmonellosis in mice.

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Acidified milk formula supplemented with bifidobacterium lactis: impact on infant diarrhea in residential care settings

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Effect of a probiotic infant formula on infections in child care centers: comparison of two probiotic agents

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Aberrant composition of gut microbiota of allergic infants: a target of bifidobacterial therapy at weaning?

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Probiotics in the management of atopic eczema

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Immunomodulation of human blood cells following the ingestion of lactic acid bacteria.

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

How host-microbial interactions shape the nutrient environment of the mammalian intestine

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Gut flora in health and disease

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Microbiology. The thin line between gut commensal and pathogen

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Bacterial contributions to mammalian gut development

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

The gut microbiota as an environmental factor that regulates fat storage

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Carbon nutrition of Escherichia coli in the mouse intestine

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

The genome sequence of the probiotic intestinal bacterium Lactobacillus johnsonii NCC 533

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Genome data mining of lactic acid bacteria: the impact of bioinformatics

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

The genome sequence of Bifidobacterium longum reflects its adaptation to the human gastrointestinal tract

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Mucin degradation in human colon ecosystems. Isolation and properties of fecal strains that degrade ABH blood group antigens and oligosaccharides from mucin glycoproteins

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Fermentation of pectin and glucose, and activity of pectin-degrading enzymes in the rabbit caecal bacterium Bifidobacterium pseudolongum

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Fermentation of fructooligosaccharides by lactic acid bacteria and bifidobacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Prebiotic effects of inulin and oligofructose

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Prebiotic carbohydrates modify the mucosa associated microflora of the human large bowel

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

A crucial role for exopolysaccharide modification in bacterial biofilm formation, immune evasion, and virulence

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Isolation and characterization of exocellular polysaccharides produced by Bifidobacterium longum

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Anticancerogenic effect of a novel chiroinositol-containing polysaccharide from Bifidobacterium bifidum BGN4.

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Investigation of protein export in Bifidobacterium breve UCC2003.

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

A Genomic View of the Human-Bacteroides thetaiotaomicron Symbiosis

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Cloning and expression of a type 1 fimbrial subunit of Actinomyces viscosus T14V.

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Cloning and nucleotide sequence of a gene for Actinomyces naeslundii WVU45 type 2 fimbriae

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Different type 1 fimbrial genes and tropisms of commensal and potentially pathogenic Actinomyces spp. with different salivary acidic proline-rich protein and statherin ligand specificities

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

SERP1, a serine proteinase inhibitor encoded by myxoma virus, is a secreted glycoprotein that interferes with inflammation

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Quorum sensing by peptide pheromones and two-component signal-transduction systems in Gram-positive bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Regulatory effects of bifidobacteria on the growth of other colonic bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Bifidobacterium strains from resident infant human gastrointestinal microflora exert antimicrobial activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Screening of Bifidobacterium strains isolated from human faeces for antagonistic activities against potentially bacterial pathogens

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Production of antibacterial substances by bifidobacterial isolates from infant stool active against Listeria monocytogenes

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Antagonistic activities of lactobacilli and bifidobacteria against microbial pathogens

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Lantibiotics produced by lactic acid bacteria: structure, function and applications.

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Genetic structure of the Enterococcus faecalis plasmid pAD1-encoded cytolytic toxin system and its relationship to lantibiotic determinants

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Bile salt hydrolase of Bifidobacterium longum-biochemical and genetic characterization

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Screening of lactic acid bacteria for bile salt hydrolase activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Purification and characterization of three different types of bile salt hydrolases from Bifidobacterium strains

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Cloning and characterization of the bile salt hydrolase genes (bsh) from Bifidobacterium bifidum strains

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Mining the microbiota of the neonatal gastrointestinal tract for conjugated linoleic acid-producing bifidobacteria.

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Conjugated linoleic acid biosynthesis by human-derived Bifidobacterium species

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Characterization and heterologous expression of the oxalyl coenzyme A decarboxylase gene from Bifidobacterium lactis

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Comparative genomics of BCG vaccines by whole-genome DNA microarray

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

A whole-genome microarray reveals genetic diversity among Helicobacter pylori strains

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

A proteomic view of Bifidobacterium infantis generated by multi-dimensional chromatography coupled with tandem mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

The effect of reducing agents on the recovery of injured Bifidobacterium cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Relationship between oxygen sensitivity and oxygen metabolism of Bifidobacterium species

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Metabolic and biochemical responses of probiotic bacteria to oxygen

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

DNA damage and oxygen radical toxicity

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Manganese: elemental defence for a life with oxygen

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Staphylococcus aureus coenzyme A disulfide reductase, a new subfamily of pyridine nucleotide-disulfide oxidoreductase. Sequence, expression, and analysis of cdr.

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Streptococcus mutans H2O2-forming NADH oxidase is an alkyl hydroperoxide reductase protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Essential thioredoxin-dependent peroxiredoxin system from Helicobacter pylori: genetic and kinetic characterization

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

RsrA, an anti-sigma factor regulated by redox change

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Role of the dpr product in oxygen tolerance in Streptococcus mutans

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Iron incorporation into Escherichia coli Dps gives rise to a ferritin-like microcrystalline core

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Dps protects cells against multiple stresses during stationary phase

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Improved stress tolerance of GroESL-overproducing Lactococcus lactis and probiotic Lactobacillus paracasei NFBC 338.

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Evaluation of a nutrient starvation model of Mycobacterium tuberculosis persistence by gene and protein expression profiling

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

The extracytoplasmic function (ECF) sigma factors

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Defining the disulphide stress response in Streptomyces coelicolor A3(2): identification of the sigmaR regulon.

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

RshA, an anti‐sigma factor that regulates the activity of the mycobacterial stress response sigma factor SigH

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Transcriptional analysis of the groES-groEL1, groEL2, and dnaK genes in Corynebacterium glutamicum: characterization of heat shock-induced promoters

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Dissection of the heat-shock response in Mycobacterium tuberculosis using mutants and microarrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Dual control of Helicobacter pylori heat shock gene transcription by HspR and HrcA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Molecular characterization of three plasmids from Bifidobacterium longum

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Characterization of the plasmid pMB1 from Bifidobacterium longum and its use for shuttle vector construction.

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Sequence analysis of plasmid pKJ50 from Bifidobacterium longum

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Transformation of Bifidobacterium longum with pRM2, a constructed Escherichia coli-B. longum shuttle vector.

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Construction of Escherichia coli-Bifidobacterium longum shuttle vector transforming B. longum 105-A and 108-A.

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Improved cloning vectors for Bifidobacterium spp.

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

A convenient and reproducible method to genetically transform bacteria of the genus Bifidobacterium

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Identification of two-component regulatory systems in Bifidobacterium infantis by functional complementation and degenerate PCR approaches

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

New thermosensitive plasmid for gram-positive bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Nucleotide sequence, expression and transcriptional analysis of the Bifidobacterium longum MB 219 lacZ gene.

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Induction of sucrose utilization genes from Bifidobacterium lactis by sucrose and raffinose

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Cloned cytosine deaminase gene expression of Bifidobacterium longum and application to enzyme/pro-drug therapy of hypoxic solid tumors

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Analysis of the genome structure of the nonpathogenic probiotic Escherichia coli strain Nissle 1917

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

Extensive surface diversity of a commensal microorganism by multiple DNA inversions

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FMRRE.2005.04.010

10.1016/J.FMRRE.2005.04.010

21 January 2018

Identifiers

DOI

1 reference

12 August 2017

1 reference