(Q36171482)

English

Comparison of two capillary gel electrophoresis systems for Clostridium difficile ribotyping, using a panel of ribotype 027 isolates and whole-genome sequences as a reference standard

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scholarly article

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Europe PubMed Central

PMC publication ID

12 August 2017

Comparison of two capillary gel electrophoresis systems for Clostridium difficile ribotyping, using a panel of ribotype 027 isolates and whole-genome sequences as a reference standard (English)

1 reference

Europe PubMed Central

PMC publication ID

12 August 2017

electrophoresis

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Clostridium difficile

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whole genome sequencing

1 reference

based on heuristic

inferred from title

8

object named as

Gwendolyn L Gilbert

1 reference

Europe PubMed Central

PMC publication ID

12 August 2017

2

object named as

Fanrong Kong

1 reference

Europe PubMed Central

PMC publication ID

12 August 2017

1

object named as

Meng Xiao

1 reference

Europe PubMed Central

PMC publication ID

12 August 2017

4

object named as

Qinning Wang

1 reference

Europe PubMed Central

PMC publication ID

12 August 2017

author name string

Ping Jin

3

1 reference

Europe PubMed Central

PMC publication ID

12 August 2017

Kelin Xiao

5

1 reference

Europe PubMed Central

PMC publication ID

12 August 2017

Neisha Jeoffreys

6

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Europe PubMed Central

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12 August 2017

Gregory James

7

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Europe PubMed Central

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12 August 2017

language of work or name

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publication date

12 June 2012

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Europe PubMed Central

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12 August 2017

Journal of Clinical Microbiology

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Europe PubMed Central

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12 August 2017

50

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Europe PubMed Central

PMC publication ID

12 August 2017

8

1 reference

Europe PubMed Central

PMC publication ID

12 August 2017

2755-2760

1 reference

Europe PubMed Central

PMC publication ID

12 August 2017

Emergence of new PCR ribotypes from the hypervirulent Clostridium difficile 027 lineage

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3421540

1 October 2017

Evaluating the fidelity of de novo short read metagenomic assembly using simulated data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3421540

1 October 2017

Comparison of sequence reads obtained from three next-generation sequencing platforms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3421540

1 October 2017

Mechanisms behind variation in the Clostridium difficile 16S-23S rRNA intergenic spacer region.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3421540

1 October 2017

PCR-based method for targeting 16S-23S rRNA intergenic spacer regions among Vibrio species

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3421540

1 October 2017

Comparative genome and phenotypic analysis of Clostridium difficile 027 strains provides insight into the evolution of a hypervirulent bacterium

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3421540

1 October 2017

Characterization of Clostridium difficile isolates using capillary gel electrophoresis-based PCR ribotyping.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3421540

1 October 2017

Comparison of seven techniques for typing international epidemic strains of Clostridium difficile: restriction endonuclease analysis, pulsed-field gel electrophoresis, PCR-ribotyping, multilocus sequence typing, multilocus variable-number tandem-rep

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3421540

1 October 2017

The mosaic nature of intergenic 16S-23S rRNA spacer regions suggests rRNA operon copy number variation in Clostridium difficile strains.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3421540

1 October 2017

Comparison of PCR-ribotyping, arbitrarily primed PCR, and pulsed-field gel electrophoresis for typing Clostridium difficile

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3421540

1 October 2017

PCR targeted to the 16S-23S rRNA gene intergenic spacer region of Clostridium difficile and construction of a library consisting of 116 different PCR ribotypes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3421540

1 October 2017

Comparative analysis of Clostridium difficile clinical isolates belonging to different genetic lineages and time periods

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3421540

2 July 2018

Clostridium difficile PCR ribotype 176 in the Czech Republic and Poland.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3421540

23 September 2018

Assessment of DNA degradation and the genotyping success of highly degraded samples.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3421540

23 September 2018

Rapid, automated epidemiological typing of methicillin-resistant Staphylococcus aureus.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3421540

23 September 2018

Development of a new PCR-ribotyping method for Clostridium difficile based on ribosomal RNA gene sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3421540

23 September 2018

Typing of Clostridium difficile strains by PCR-amplification of variable length 16S-23S rDNA spacer regions

1 reference

https://pubmed.ncbi.nlm.nih.gov/22692737

12 December 2020

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Identifiers

10.1128/JCM.00777-12

1 reference

Europe PubMed Central

PMC publication ID

12 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

12 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

12 August 2017

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