(Q36171789)

12 August 2017

Biocellion: accelerating computer simulation of multicellular biological system models (English)

1 reference

12 August 2017

1 reference

1 reference

Jason McDermott

3

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Ilya Shmulevich

series ordinal

5

object named as

Ilya Shmulevich

1 reference

12 August 2017

Seunghwa Kang

1

1 reference

12 August 2017

Simon Kahan

series ordinal

2

1 reference

12 August 2017

Nicholas Flann

series ordinal

4

1 reference

12 August 2017

language of work or name

English

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publication date

26 July 2014

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12 August 2017

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12 August 2017

30

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12 August 2017

21

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12 August 2017

3101-3108

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Simulating microbial community patterning using Biocellion

12 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609016

Morpheus: a user-friendly modeling environment for multiscale and multicellular systems biology.

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609016

Strong inter-population cooperation leads to partner intermixing in microbial communities

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609016

A whole-cell computational model predicts phenotype from genotype

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609016

Emergent behaviors from a cellular automaton model for invasive tumor growth in heterogeneous microenvironments

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609016

iDynoMiCS: next-generation individual-based modelling of biofilms

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609016

Three-dimensional multispecies nonlinear tumor growth-II: Tumor invasion and angiogenesis

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609016

Deterministic and stochastic models of genetic regulatory networks

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609016

Individual-based modelling: an essential tool for microbiology

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609016

The Virtual Cell: a software environment for computational cell biology

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609016

Engineering radiation-resistant bacteria for environmental biotechnology

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609016

Simulation of biological cell sorting using a two-dimensional extended Potts model

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609016

Feedback-controlled LED photobioreactor for photophysiological studies of cyanobacteria.

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609016

Multi-scale modeling in morphogenesis: a critical analysis of the cellular Potts model

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609016

Modeling microbial dynamics in heterogeneous environments: growth on soil carbon sources

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609016

A parallel implementation of the Cellular Potts Model for simulation of cell-based morphogenesis

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609016

Spatial and stochastic cellular modeling with the Smoldyn simulator.

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609016

Social evolution of spatial patterns in bacterial biofilms: when conflict drives disorder.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609016

Individual-based and continuum models of growing cell populations: a comparison.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609016

CompuCell, a multi-model framework for simulation of morphogenesis.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609016

Mathematical modelling of flow through vascular networks: implications for tumour-induced angiogenesis and chemotherapy strategies.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609016

Continuous and discrete mathematical models of tumor-induced angiogenesis.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4609016

Reconstruction of tissues by dissociated cells. Some morphogenetic tissue movements and the sorting out of embryonic cells may have a common explanation

23 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25064572

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Modeling multicellular systems using subcellular elements

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25064572

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/BIOINFORMATICS/BTU498

1 reference

journals/bioinformatics/KangKMFS14

12 August 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

12 August 2017

1 reference