(Q36203100)

12 August 2017

The exocyclic groups of DNA modulate the affinity and positioning of the histone octamer (English)

1 reference

12 August 2017

M Buttinelli

1

1 reference

12 August 2017

A Minnock

2

1 reference

12 August 2017

G Panetta

3

1 reference

12 August 2017

M Waring

4

1 reference

12 August 2017

A Travers

5

1 reference

12 August 2017

language of work or name

English

0 references

publication date

1 July 1998

1 reference

Proceedings of the National Academy of Sciences of the United States of America

12 August 2017

1 reference

12 August 2017

95

1 reference

12 August 2017

15

1 reference

12 August 2017

8544-8549

1 reference

Crystal structure of the nucleosome core particle at 2.8 A resolution

12 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=21112

X-ray and solution studies of DNA oligomers and implications for the structural basis of A-tract-dependent curvature

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=21112

DNA methylation: a molecular lock

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=21112

Nucleosome packaging and nucleosome positioning of genomic DNA

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=21112

PCR-based development of DNA substrates containing modified bases: an efficient system for investigating the role of the exocyclic groups in chemical and structural recognition by minor groove binding drugs and proteins

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=21112

Localized DNA flexibility contributes to target site selection by DNA-bending proteins.

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=21112

Propeller-twisting of base-pairs and the conformational mobility of dinucleotide steps in DNA.

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=21112

DNA sequence-specific reading by echinomycin: role of hydrogen bonding and stacking interactions.

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=21112

Sequence-dependent bending propensity of DNA as revealed by DNase I: parameters for trinucleotides

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=21112

Analysis of local helix bending in crystal structures of DNA oligonucleotides and DNA-protein complexes

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=21112

The influence of exocyclic substituents of purine bases on DNA curvature

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=21112

The bending of DNA in nucleosomes and its wider implications

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=21112

Artificial nucleosome positioning sequences

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=21112

CpG-rich islands and the function of DNA methylation

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=21112

Twin hydroxymethyluracil-A base pair steps define the binding site for the DNA-binding protein TF1.

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=21112

DNA bending and its relation to nucleosome positioning.

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=21112

Sequence periodicities in chicken nucleosome core DNA.

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=21112

Analysis of local helix geometry in three B-DNA decamers and eight dodecamers

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=21112

Using hydroxyl radical to probe DNA structure

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=21112

Kinetic analysis of deoxyribonuclease I cleavages in the nucleosome core: Evidence for a DNA superhelix

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=21112

Structure of the nucleosome core particle at 7 Å resolution

2 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.95.15.8544

System for accurate one-dimensional gel analysis including high-resolution quantitative footprinting.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=21112

Sequence-dependent DNA structure. The role of base stacking interactions

22 September 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.95.15.8544

B-DNA twisting correlates with base-pair morphology.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.95.15.8544

Helix rigidity of DNA: the meroduplex as an experimental paradigm

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.95.15.8544

DNA base-stacking interactions: a comparison of theoretical calculations with oligonucleotide X-ray crystal structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.95.15.8544

Effects of DNA sequence and histone-histone interactions on nucleosome placement

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.95.15.8544

Effects of base substitutions on the binding of a DNA-bending protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.95.15.8544

Iron(II) EDTA used to measure the helical twist along any DNA molecule

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.95.15.8544

Reconstitution of nucleosome core particles containing glucosylated DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.95.15.8544

Expanded CTG triplet blocks from the myotonic dystrophy gene create the strongest known natural nucleosome positioning elements

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.95.15.8544

Chemical determinants of DNA bending at adenine-thymine tracts

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.95.15.8544

Pyrimidine 5-methyl groups influence the magnitude of DNA curvature

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.95.15.8544

Methylation at CpG sequences does not influence histone H1 binding to a nucleosome including a Xenopus borealis 5 S rRNA gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.95.15.8544

CpG methylation remodels chromatin structure in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.95.15.8544

Identification and characterization of genomic nucleosome-positioning sequences

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/9671714

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Nucleosome interactions with a human Alu element. Transcriptional repression and effects of template methylation

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/9671714

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.95.15.8544

1 reference

12 August 2017

0 references

1 reference

12 August 2017

PubMed publication ID

9671714

1 reference