(Q36228535)

12 August 2017

Exploring the DNA mimicry of the Ocr protein of phage T7. (English)

1 reference

12 August 2017

Gareth A Roberts

1

1 reference

12 August 2017

Augoustinos S Stephanou

2

1 reference

12 August 2017

Nisha Kanwar

3

1 reference

12 August 2017

Angela Dawson

4

1 reference

12 August 2017

Laurie P Cooper

5

1 reference

12 August 2017

Kai Chen

6

1 reference

12 August 2017

Margaret Nutley

7

1 reference

12 August 2017

Alan Cooper

8

1 reference

12 August 2017

Garry W Blakely

9

1 reference

12 August 2017

David T F Dryden

10

1 reference

12 August 2017

language of work or name

English

0 references

publication date

7 June 2012

1 reference

12 August 2017

Nucleic Acids Research

1 reference

12 August 2017

40

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12 August 2017

16

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12 August 2017

8129-8143

1 reference

Creative Commons Attribution-NonCommercial 3.0 Unported

12 August 2017

start time

4 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Structure and operation of the DNA-translocating type I DNA restriction enzymes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439906

Defense islands in bacterial and archaeal genomes and prediction of novel defense systems

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439906

REBASE--a database for DNA restriction and modification: enzymes, genes and genomes

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439906

Dissection of the DNA mimicry of the bacteriophage T7 Ocr protein using chemical modification

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439906

Extensive DNA mimicry by the ArdA anti-restriction protein and its role in the spread of antibiotic resistance

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439906

The structure of M.EcoKI Type I DNA methyltransferase with a DNA mimic antirestriction protein

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439906

An inducible lambdoid prophage encoding cytolethal distending toxin (Cdt-I) and a type III effector protein in enteropathogenic Escherichia coli

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439906

Hypervariation and phase variation in the bacteriophage 'resistome'.

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439906

DNA mimicry by proteins and the control of enzymatic activity on DNA.

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439906

Protein mimicry of DNA and pathway regulation

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439906

Mechanisms of, and barriers to, horizontal gene transfer between bacteria

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439906

The biology of restriction and anti-restriction

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439906

DNA bending by M.EcoKI methyltransferase is coupled to nucleotide flipping.

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439906

UCSF Chimera--a visualization system for exploratory research and analysis

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439906

DICHROWEB, an online server for protein secondary structure analyses from circular dichroism spectroscopic data

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439906

Tracking EcoKI and DNA fifty years on: a golden story full of surprises

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439906

Interaction of the ocr gene 0.3 protein of bacteriophage T7 with EcoKI restriction/modification enzyme

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439906

Plasmid promiscuity: meeting the challenge of DNA immigration control

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439906

Structure of Ocr from bacteriophage T7, a protein that mimics B-form DNA

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439906

Characterisation of the structure of ocr, the gene 0.3 protein of bacteriophage T7.

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439906

Solution structure of DinI provides insight into its mode of RecA inactivation

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439906

Type I restriction systems: sophisticated molecular machines (a legacy of Bertani and Weigle)

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439906

The DNA binding characteristics of the trimeric EcoKI methyltransferase and its partially assembled dimeric form determined by fluorescence polarisation and DNA footprinting

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439906

Restriction by EcoKI is enhanced by co-operative interactions between target sequences and is dependent on DEAD box motifs.

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439906

Active protection by bacteriophages T3 and T7 againstE. coli B-and K-specific restriction of their DNA

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439906

Fusion of GFP to the M.EcoKI DNA methyltransferase produces a new probe of Type I DNA restriction and modification enzymes

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439906

Antagonistic coevolution accelerates molecular evolution

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439906

Molecular evolution as predicted by natural selection.

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439906

Tightly regulated tac promoter vectors useful for the expression of unfused and fused proteins in Escherichia coli.

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439906

A mutational analysis of DNA mimicry by ocr, the gene 0.3 antirestriction protein of bacteriophage T7.

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439906

Comparative analysis of anti-restriction activities of ArdA (ColIb-P9) and Ocr (T7) proteins

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439906

Control of the endonuclease activity of type I restriction-modification systems is required to maintain chromosome integrity following homologous recombination.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439906

Is modification sufficient to protect a bacterial chromosome from a resident restriction endonuclease?

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439906

2001 Fred Griffith review lecture. Immigration control of DNA in bacteria: self versus non-self.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439906

Shape of Ocr, the gene 0.3 protein of bacteriophage T7: modeling based on light scattering experiments.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439906

The DNA translocation and ATPase activities of restriction-deficient mutants of Eco KI.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439906

Purification and characterization of the methyltransferase from the type 1 restriction and modification system of Escherichia coli K12.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439906

The interaction bacterial and phage proteins with immobilized Escherichia coli RNA polymerase

22 September 2018

1 reference

12 December 2020

Gene 0.3 of bacteriophage T7 acts to overcome the DNA restriction system of the host

1 reference

12 December 2020

Purification of the gene 0.3 protein of bacteriophage T7, an inhibitor of the DNA restriction system of Escherichia coli

1 reference

12 December 2020

Amino acid sequence of the gene 0.3 protein of bacteriophage T7 and nucleotide sequence of its mRNA

1 reference

12 December 2020

Inhibition of the type I restriction-modification enzymes EcoB and EcoK by the gene 0.3 protein of bacteriophage T7

1 reference

12 December 2020

The in vitro assembly of the EcoKI type I DNA restriction/modification enzyme and its in vivo implications

1 reference

12 December 2020

ClpX and ClpP are essential for the efficient acquisition of genes specifying type IA and IB restriction systems

1 reference

12 December 2020

The Orf18 gene product from conjugative transposon Tn916 is an ArdA antirestriction protein that inhibits type I DNA restriction-modification systems

1 reference

12 December 2020

[Antirestriction proteins ardA and Ocr as effective inhibitors of the type I restriction-modification enzymes]

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/GKS516

1 reference

12 August 2017

1 reference

12 August 2017

PubMed publication ID

22684506

1 reference