(Q36279730)

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Simulated annealing with restrained molecular dynamics using CONGEN: energy refinement of the NMR solution structures of epidermal and type-alpha transforming growth factors

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

Simulated annealing with restrained molecular dynamics using CONGEN: energy refinement of the NMR solution structures of epidermal and type-alpha transforming growth factors (English)

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

simulated annealing

1 reference

based on heuristic

inferred from title

Robert E. Bruccoleri

3

object named as

R E Bruccoleri

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

Donna Bassolino-Klimas

2

object named as

D Bassolino-Klimas

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

author name string

R Tejero

1

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

G T Montelione

4

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

publication date

1 April 1996

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

Protein Science

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

5

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

4

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

578-592

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

Simulated annealing with restrained molecular dynamics using a flexible restraint potential: theory and evaluation with simulated NMR constraints.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143379

30 September 2017

Structure of human des(1-45) factor Xa at 2.2 A resolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143379

30 September 2017

Solution structure of human type-alpha transforming growth factor determined by heteronuclear NMR spectroscopy and refined by energy minimization with restraints

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143379

30 September 2017

Solution structure of the amino-terminal fragment of urokinase-type plasminogen activator

1 reference

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30 September 2017

Human type-alpha transforming growth factor undergoes slow conformational exchange between multiple backbone conformations as characterized by nitrogen-15 relaxation measurements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143379

30 September 2017

Structure-function relationships for the EGF/TGF-alpha family of mitogens

1 reference

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Combined use of 13C chemical shift and 1H alpha-13C alpha heteronuclear NOE data in monitoring a protein NMR structure refinement

1 reference

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Lectins on a roll: the structure of E-selectin.

1 reference

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Insight into E-selectin/ligand interaction from the crystal structure and mutagenesis of the lec/EGF domains

1 reference

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Antibodies to the epidermal growth factor receptor block the biological activities of sarcoma growth factor

1 reference

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30 September 2017

Solution structure of murine epidermal growth factor: determination of the polypeptide backbone chain-fold by nuclear magnetic resonance and distance geometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143379

30 September 2017

Identification of two anti-parallel beta-sheet conformations in the solution structure of murine epidermal growth factor by proton magnetic resonance

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143379

30 September 2017

Solution structures of human transforming growth factor alpha derived from 1H NMR data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143379

30 September 2017

The solution structure of human transforming growth factor alpha

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143379

30 September 2017

Solution structure of murine epidermal growth factor determined by NMR spectroscopy and refined by energy minimization with restraints

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143379

30 September 2017

How an epidermal growth factor (EGF)-like domain binds calcium. High resolution NMR structure of the calcium form of the NH2-terminal EGF-like domain in coagulation factor X.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143379

30 September 2017

The solution structure of eglin c based on measurements of many NOEs and coupling constants and its comparison with X‐ray structures

1 reference

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The three‐dimensional structure of the first EGF‐like module of human factor IX: Comparison with EGF and TGF‐α

1 reference

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Rat epidermal growth factor: complete amino acid sequence. Homology with the corresponding murine and human proteins; isolation of a form truncated at both ends with full in vitro biological activity

1 reference

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29 June 2018

Sequence-specific 1H NMR assignments, secondary structure, and location of the calcium binding site in the first epidermal growth factor like domain of blood coagulation factor IX.

1 reference

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Calculation of protein conformations by proton-proton distance constraints. A new efficient algorithm

1 reference

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Sequence-specific 1H NMR assignments and identification of slowly exchanging amide protons in murine epidermal growth factor

1 reference

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Isolation of a mouse submaxillary gland protein accelerating incisor eruption and eyelid opening in the new-born animal

1 reference

https://pubmed.ncbi.nlm.nih.gov/8845748

12 December 2020

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Prediction of the folding of short polypeptide segments by uniform conformational sampling

1 reference

https://pubmed.ncbi.nlm.nih.gov/8845748

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Epidermal growth factor and transforming growth factor alpha

1 reference

https://pubmed.ncbi.nlm.nih.gov/8845748

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The solution structure of human epidermal growth factor

1 reference

https://pubmed.ncbi.nlm.nih.gov/8845748

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure of epidermal growth factor bound to perdeuterated dodecylphosphocholine micelles determined by two-dimensional NMR and simulated annealing calculations

1 reference

https://pubmed.ncbi.nlm.nih.gov/8845748

12 December 2020

based on heuristic

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Three-dimensional structure of the apo form of the N-terminal EGF-like module of blood coagulation factor X as determined by NMR spectroscopy and simulated folding

1 reference

https://pubmed.ncbi.nlm.nih.gov/8845748

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Human epidermal growth factor

1 reference

https://pubmed.ncbi.nlm.nih.gov/8845748

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure and expression of c-erbB-2 and EGF receptor genes in inflammatory and non-inflammatory breast cancer: prognostic significance

1 reference

https://pubmed.ncbi.nlm.nih.gov/8845748

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Crankshaft motions of the polypeptide backbone in molecular dynamics simulations of human type-alpha transforming growth factor

1 reference

https://pubmed.ncbi.nlm.nih.gov/8845748

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1002/PRO.5560050403

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

ResearchGate publication ID

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