(Q36280564)

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Integrative analysis of gene and miRNA expression profiles with transcription factor-miRNA feed-forward loops identifies regulators in human cancers

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scholarly article

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Europe PubMed Central

PMC publication ID

13 August 2017

Integrative analysis of gene and miRNA expression profiles with transcription factor-miRNA feed-forward loops identifies regulators in human cancers (English)

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Europe PubMed Central

PMC publication ID

13 August 2017

microRNA expression

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9

object named as

Dana Gabuzda

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Europe PubMed Central

PMC publication ID

13 August 2017

7

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Vikas Misra

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Europe PubMed Central

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13 August 2017

author name string

Zhenyu Yan

1

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Europe PubMed Central

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13 August 2017

Parantu K Shah

2

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Europe PubMed Central

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13 August 2017

Samir B Amin

3

1 reference

Europe PubMed Central

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13 August 2017

Mehmet K Samur

4

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Europe PubMed Central

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13 August 2017

Norman Huang

5

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Europe PubMed Central

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13 August 2017

Xujun Wang

6

1 reference

Europe PubMed Central

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13 August 2017

Hongbin Ji

8

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Europe PubMed Central

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13 August 2017

Cheng Li

10

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Europe PubMed Central

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13 August 2017

language of work or name

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publication date

29 May 2012

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Europe PubMed Central

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13 August 2017

Nucleic Acids Research

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Europe PubMed Central

PMC publication ID

13 August 2017

40

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Europe PubMed Central

PMC publication ID

13 August 2017

17

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Europe PubMed Central

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13 August 2017

e135

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Europe PubMed Central

PMC publication ID

13 August 2017

copyright license

Creative Commons Attribution-NonCommercial 3.0 Unported

7 November 2016

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April 2022 Public Data File from Crossref

copyright status

0 references

ASCL1-coexpression profiling but not single gene expression profiling defines lung adenocarcinomas of neuroendocrine nature with poor prognosis

1 reference

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30 September 2017

Aryl hydrocarbon receptor nuclear translocator is associated with tumor growth and progression of hepatocellular carcinoma

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30 September 2017

A curated database of miRNA mediated feed-forward loops involving MYC as master regulator

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3458521

30 September 2017

Hallmarks of Cancer: The Next Generation

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30 September 2017

NCBI GEO: archive for functional genomics data sets--10 years on

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30 September 2017

miRBase: integrating microRNA annotation and deep-sequencing data

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miR-210 is overexpressed in late stages of lung cancer and mediates mitochondrial alterations associated with modulation of HIF-1 activity

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30 September 2017

Targeting microRNAs in cancer: rationale, strategies and challenges

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microRNA-122 as a regulator of mitochondrial metabolic gene network in hepatocellular carcinoma

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CircuitsDB: a database of mixed microRNA/transcription factor feed-forward regulatory circuits in human and mouse.

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30 September 2017

Mammalian microRNAs predominantly act to decrease target mRNA levels

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30 September 2017

Integrative genomic profiling of human prostate cancer

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Identifying mRNA targets of microRNA dysregulated in cancer: with application to clear cell Renal Cell Carcinoma

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30 September 2017

International network of cancer genome projects

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Targeting CREB for cancer therapy: friend or foe

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Malignant germ cell tumors display common microRNA profiles resulting in global changes in expression of messenger RNA targets

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30 September 2017

Coupling transcriptional and post-transcriptional miRNA regulation in the control of cell fate.

1 reference

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A novel microRNA and transcription factor mediated regulatory network in schizophrenia

1 reference

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30 September 2017

MYCN/c-MYC-induced microRNAs repress coding gene networks associated with poor outcome in MYCN/c-MYC-activated tumors.

1 reference

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30 September 2017

TransmiR: a transcription factor-microRNA regulation database

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30 September 2017

Causes and consequences of microRNA dysregulation in cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3458521

30 September 2017

Characterization of B- and T-lineage acute lymphoblastic leukemia by integrated analysis of MicroRNA and mRNA expression profiles.

1 reference

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Genome-wide survey of microRNA-transcription factor feed-forward regulatory circuits in human.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3458521

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A microRNA imparts robustness against environmental fluctuation during development

1 reference

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Reflecting on 25 years with MYC.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3458521

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Widespread changes in protein synthesis induced by microRNAs

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The impact of microRNAs on protein output

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Growth suppression of lung cancer cells by targeting cyclic AMP response element-binding protein

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OncomiRs: the discovery and progress of microRNAs in cancers

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The role of site accessibility in microRNA target recognition

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Global and local architecture of the mammalian microRNA-transcription factor regulatory network.

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MicroRNA-mediated feedback and feedforward loops are recurrent network motifs in mammals

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A microRNA component of the p53 tumour suppressor network

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1 reference

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Processing of intronic microRNAs

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microRNA target predictions in animals

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1 reference

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TFBS: Computational framework for transcription factor binding site analysis

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12 December 2020

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10.1093/NAR/GKS395

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

PMC publication ID

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Europe PubMed Central

PMC publication ID

13 August 2017

PubMed publication ID

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Europe PubMed Central

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13 August 2017

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