(Q36281363)

English

Mapping of ATP binding regions in poly(A) polymerases by photoaffinity labeling and by mutational analysis identifies a domain conserved in many nucleotidyltransferases

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

Mapping of ATP binding regions in poly(A) polymerases by photoaffinity labeling and by mutational analysis identifies a domain conserved in many nucleotidyltransferases (English)

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

mutational analysis

1 reference

based on heuristic

inferred from title

author name string

Martin G

1

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

Jenö P

2

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

Keller W

3

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

publication date

1 November 1999

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

Protein Science

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

8

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

11

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

2380-2391

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

3'-End processing of pre-mRNA in eukaryotes

1 reference

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30 September 2017

DNA polymerase beta-like nucleotidyltransferase superfamily: identification of three new families, classification and evolutionary history

1 reference

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Crystal structures of open and closed forms of binary and ternary complexes of the large fragment of Thermus aquaticus DNA polymerase I: structural basis for nucleotide incorporation.

1 reference

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30 September 2017

The CCA-adding enzyme has a single active site

1 reference

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30 September 2017

Crystal structure of a bacteriophage T7 DNA replication complex at 2.2 A resolution

1 reference

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30 September 2017

Mechanism and regulation of mRNA polyadenylation

1 reference

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30 September 2017

Crystal structures of human DNA polymerase beta complexed with gapped and nicked DNA: evidence for an induced fit mechanism

1 reference

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30 September 2017

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

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Crystal structure of a thermostable Bacillus DNA polymerase I large fragment at 2.1 A resolution

1 reference

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Development of an in vitro mRNA decay system for Escherichia coli: poly(A) polymerase I is necessary to trigger degradation

1 reference

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The end of the message--another link between yeast and mammals.

1 reference

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30 September 2017

Mitotic chromosome condensation in the rDNA requires TRF4 and DNA topoisomerase I in Saccharomyces cerevisiae.

1 reference

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The Schizosaccharomyces pombe pla1 gene encodes a poly(A) polymerase and can functionally replace its Saccharomyces cerevisiae homologue

1 reference

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30 September 2017

Significance of the O-helix residues of Escherichia coli DNA polymerase I in DNA synthesis: dynamics of the dNTP binding pocket

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144201

30 September 2017

Mutational analysis of mammalian poly(A) polymerase identifies a region for primer binding and catalytic domain, homologous to the family X polymerases, and to other nucleotidyltransferases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144201

30 September 2017

Prediction of protein secondary structure at better than 70% accuracy

1 reference

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30 September 2017

Multiple forms of poly(A) polymerases in human cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144201

30 September 2017

Molecular structure of kanamycin nucleotidyltransferase determined to 3.0-A resolution

1 reference

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30 September 2017

2.3 A crystal structure of the catalytic domain of DNA polymerase beta

1 reference

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30 September 2017

Cloning and characterization of a Xenopus poly(A) polymerase

1 reference

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30 September 2017

Deoxynucleoside triphosphate and pyrophosphate binding sites in the catalytically competent ternary complex for the polymerase reaction catalyzed by DNA polymerase I (Klenow fragment).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144201

30 September 2017

Identification of the nucleotide binding site of HIV-1 reverse transcriptase using dTTP as a photoaffinity label

1 reference

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30 September 2017

A single residue in DNA polymerases of the Escherichia coli DNA polymerase I family is critical for distinguishing between deoxy- and dideoxyribonucleotides

1 reference

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30 September 2017

Structural investigation of the antibiotic and ATP-binding sites in kanamycin nucleotidyltransferase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144201

30 September 2017

Function and structure relationships in DNA polymerases

1 reference

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30 September 2017

Crystal structure of rat DNA polymerase beta: evidence for a common polymerase mechanism

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144201

30 September 2017

Structures of ternary complexes of rat DNA polymerase beta, a DNA template-primer, and ddCTP

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144201

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Poly (A) polymerases in the nucleus and cytoplasm of frog oocytes: dynamic changes during oocyte maturation and early development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144201

30 September 2017

Structure of large fragment of Escherichia coli DNA polymerase I complexed with dTMP

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144201

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Tricine-sodium dodecyl sulfate-polyacrylamide gel electrophoresis for the separation of proteins in the range from 1 to 100 kDa

1 reference

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30 September 2017

Identification of residues critical for the polymerase activity of the Klenow fragment of DNA polymerase I from Escherichia coli

1 reference

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An attempt to unify the structure of polymerases

1 reference

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30 September 2017

Cloning and expression of the essential gene for poly(A) polymerase from S. cerevisiae

1 reference

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30 September 2017

Isolation and expression of cDNA clones encoding mammalian poly(A) polymerase

1 reference

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30 September 2017

Identification of the gene for an Escherichia coli poly(A) polymerase

1 reference

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A general and fast method to generate multiple site directed mutations

1 reference

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Structural and functional insights provided by crystal structures of DNA polymerases and their substrate complexes.

1 reference

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CCA-adding enzymes and poly(A) polymerases are all members of the same nucleotidyltransferase superfamily: characterization of the CCA-adding enzyme from the archaeal hyperthermophile Sulfolobus shibatae.

1 reference

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52 Photoaffinity labeling of nucleotide binding sites with 8-azidopurine analogs: Techniques and applications

1 reference

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1 reference

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Photoaffinity labeling of the Klenow fragment with 8-azido-dATP.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144201

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Purification and characterization of a mammalian polyadenylate polymerase involved in the 3' end processing of messenger RNA precursors.

1 reference

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Poly(A) polymerase and a dissociable polyadenylation stimulatory factor encoded by vaccinia virus

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1 reference

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DNA polymerase beta belongs to an ancient nucleotidyltransferase superfamily

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144201

22 September 2018

How E. coli DNA polymerase I (Klenow fragment) distinguishes between deoxy- and dideoxynucleotides

1 reference

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1 reference

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inferred from PubMed ID database lookup

Identification of peptides from the adenine binding domains of ATP and AMP in adenylate kinase: isolation of photoaffinity-labeled peptides by metal chelate chromatography

1 reference

https://pubmed.ncbi.nlm.nih.gov/10595540

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https://pubmed.ncbi.nlm.nih.gov/10595540

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1 reference

https://pubmed.ncbi.nlm.nih.gov/10595540

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Protein fingerprinting by SDS-gel electrophoresis after partial fragmentation with CNBr

1 reference

https://pubmed.ncbi.nlm.nih.gov/10595540

12 December 2020

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Photoaffinity labeling of terminal deoxynucleotidyl transferase. 2. Identification of peptides in the nucleotide binding domain

1 reference

https://pubmed.ncbi.nlm.nih.gov/10595540

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dNTP binding site in rat DNA polymerase beta revealed by controlled proteolysis and azido photoprobe cross-linking

1 reference

https://pubmed.ncbi.nlm.nih.gov/10595540

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The biochemistry of polyadenylation

1 reference

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Identifiers

10.1110/PS.8.11.2380

0 references

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

13 August 2017

ResearchGate publication ID

0 references

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