(Q36291699)

13 August 2017

The transcriptome of HIV-1 infected intestinal CD4+ T cells exposed to enteric bacteria (English)

1 reference

13 August 2017

0 references

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28241075%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

Alyson C Yoder

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28241075%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

Kejun Guo

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28241075%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

Michael S Harper

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28241075%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

Christina Ochsenbauer

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28241075%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

Cara C Wilson

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28241075%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

author name string

Stephanie M Dillon

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28241075%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

Tzu Phang

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28241075%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

Eric J Lee

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28241075%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

Karen Helm

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28241075%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

John C Kappes

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28241075%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

Martin D McCarter

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28241075%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

publication date

27 February 2017

1 reference

13 August 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28241075%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

volume

13

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28241075%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

issue

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28241075%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

page(s)

e1006226

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28241075%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

13 June 2020

copyright license

start time

27 February 2017

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Human Th17 Cells Lack HIV-Inhibitory RNases and Are Highly Permissive to Productive HIV Infection

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30 September 2017

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Enhancement of HIV-1 infection and intestinal CD4+ T cell depletion ex vivo by gut microbes altered during chronic HIV-1 infection

30 September 2017

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Interferon-α Subtypes in an Ex Vivo Model of Acute HIV-1 Infection: Expression, Potency and Effector Mechanisms

30 September 2017

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T(H)17 cells promote microbial killing and innate immune sensing of DNA via interleukin 26

30 September 2017

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Gut dendritic cell activation links an altered colonic microbiome to mucosal and systemic T-cell activation in untreated HIV-1 infection

30 September 2017

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Dynamic regulation of host restriction factor expression over the course of HIV-1 infection in vivo

30 September 2017

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Deep sequencing of HIV-infected cells: insights into nascent transcription and host-directed therapy

30 September 2017

1 reference

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A compositional look at the human gastrointestinal microbiome and immune activation parameters in HIV infected subjects

30 September 2017

1 reference

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Microbial exposure alters HIV-1-induced mucosal CD4+ T cell death pathways Ex vivo.

30 September 2017

1 reference

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HLA-DM and HLA-DO, key regulators of MHC-II processing and presentation

30 September 2017

1 reference

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TNF and TNF receptor superfamily members in HIV infection: new cellular targets for therapy?

30 September 2017

1 reference

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HIV Infection is associated with compositional and functional shifts in the rectal mucosal microbiota

30 September 2017

1 reference

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An altered intestinal mucosal microbiome in HIV-1 infection is associated with mucosal and systemic immune activation and endotoxemia.

30 September 2017

1 reference

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Transcriptional profiling reveals molecular signatures associated with HIV permissiveness in Th1Th17 cells and identifies peroxisome proliferator-activated receptor gamma as an intrinsic negative regulator of viral replication

30 September 2017

1 reference

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Alterations in the gut microbiota associated with HIV-1 infection

30 September 2017

1 reference

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Preferential HIV infection of CCR6+ Th17 cells is associated with higher levels of virus receptor expression and lack of CCR5 ligands

30 September 2017

1 reference

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Dysbiosis of the gut microbiota is associated with HIV disease progression and tryptophan catabolism

30 September 2017

1 reference

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HIV-1 causes CD4 cell death through DNA-dependent protein kinase during viral integration.

30 September 2017

1 reference

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Phenotypic properties of transmitted founder HIV-1

30 September 2017

1 reference

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24 hours in the life of HIV-1 in a T cell line

30 September 2017

1 reference

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Microbial translocation in the pathogenesis of HIV infection and AIDS.

30 September 2017

1 reference

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FOXO transcription factors throughout T cell biology

30 September 2017

1 reference

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Microbial translocation in HIV infection: causes, consequences and treatment opportunities

30 September 2017

1 reference

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Exon level transcriptomic profiling of HIV-1-infected CD4(+) T cells reveals virus-induced genes and host environment favorable for viral replication.

30 September 2017

1 reference

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HIV-1 infection of human intestinal lamina propria CD4+ T cells in vitro is enhanced by exposure to commensal Escherichia coli

30 September 2017

1 reference

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The molecular basis of the memory T cell response: differential gene expression and its epigenetic regulation

30 September 2017

1 reference

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The nuclear receptor PPARs as important regulators of T-cell functions and autoimmune diseases

30 September 2017

1 reference

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Generation of transmitted/founder HIV-1 infectious molecular clones and characterization of their replication capacity in CD4 T lymphocytes and monocyte-derived macrophages

30 September 2017

1 reference

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Gene array studies in HIV-1 infection

30 September 2017

1 reference

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Molecular characterization of stool microbiota in HIV-infected subjects by panbacterial and order-level 16S ribosomal DNA (rDNA) quantification and correlations with immune activation

30 September 2017

1 reference

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Replication competent molecular clones of HIV-1 expressing Renilla luciferase facilitate the analysis of antibody inhibition in PBMC.

30 September 2017

1 reference

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Association of Tat with promoters of PTEN and PP2A subunits is key to transcriptional activation of apoptotic pathways in HIV-infected CD4+ T cells

30 September 2017

1 reference

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Antiproliferative Properties of Type I and Type II Interferon

30 September 2017

1 reference

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Susceptibility of human Th17 cells to human immunodeficiency virus and their perturbation during infection.

30 September 2017

1 reference

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Genetic identity, biological phenotype, and evolutionary pathways of transmitted/founder viruses in acute and early HIV-1 infection

30 September 2017

1 reference

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The significance of OX40 and OX40L to T-cell biology and immune disease.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5344538

Role of the gastrointestinal tract in establishing infection in primates and humans

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5344538

Evidence for dendritic cell-dependent CD4(+) T helper-1 type responses to commensal bacteria in normal human intestinal lamina propria

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5344538

HIV infection and the gastrointestinal immune system

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5344538

Tat-induced FOXO3a is a key mediator of apoptosis in HIV-1-infected human CD4+ T lymphocytes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5344538

The 14-3-3 proteins: integrators of diverse signaling cues that impact cell fate and cancer development

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5344538

IL-23 promotes maintenance but not commitment to the Th17 lineage

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5344538

Human immunodeficiency virus type 1, human protein interaction database at NCBI.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5344538

Differential Th17 CD4 T-cell depletion in pathogenic and nonpathogenic lentiviral infections

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5344538

Identification and characterization of transmitted and early founder virus envelopes in primary HIV-1 infection

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5344538

Genetic analysis of innate immunity in Crohn's disease and ulcerative colitis identifies two susceptibility loci harboring CARD9 and IL18RAP.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5344538

Death by a thousand cuts: granzyme pathways of programmed cell death

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5344538

Rapid onset of intestinal epithelial barrier dysfunction in primary human immunodeficiency virus infection is driven by an imbalance between immune response and mucosal repair and regeneration

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5344538

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5344538

A network-based analysis of systemic inflammation in humans

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5344538

Bioconductor: open software development for computational biology and bioinformatics

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5344538

CD4+ T cell depletion during all stages of HIV disease occurs predominantly in the gastrointestinal tract

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5344538

Severe CD4+ T-cell depletion in gut lymphoid tissue during primary human immunodeficiency virus type 1 infection and substantial delay in restoration following highly active antiretroviral therapy

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5344538

In vivo evolution of human immunodeficiency virus type 1 toward increased pathogenicity through CXCR4-mediated killing of uninfected CD4 T cells

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5344538

Emergence of resistant human immunodeficiency virus type 1 in patients receiving fusion inhibitor (T-20) monotherapy.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5344538

OX40 stimulation by gp34/OX40 ligand enhances productive human immunodeficiency virus type 1 infection

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5344538

MAP-kinase signaling pathways in T cells

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5344538

Regulation of the G1 phase of the mammalian cell cycle

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5344538

Human intestinal lamina propria lymphocytes are naturally permissive to HIV-1 infection.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5344538

c-Myc target genes involved in cell growth, apoptosis, and metabolism

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5344538

Role of p38 mitogen-activated protein kinase in HIV type 1 production in vitro

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5344538

The critical role of p38 MAP kinase in T cell HIV-1 replication.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5344538

Interactions of the transcription factor AP-1 with the long terminal repeat of different human immunodeficiency virus type 1 strains in Jurkat, glial, and neuronal cells

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5344538

The CD4 (T4) antigen is an essential component of the receptor for the AIDS retrovirus

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5344538

Enteric mucosa integrity in the presence of a preserved innate interleukin 22 compartment in HIV type 1-treated individuals

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5344538

HIV-specific cytolytic CD4 T cell responses during acute HIV infection predict disease outcome

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5344538

The survival of memory CD4+ T cells within the gut lamina propria requires OX40 and CD30 signals

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5344538

Human immunodeficiency virus long terminal repeat responds to transformation by the mutant T24 H-ras1 oncogene and it contains multiple AP-1 binding TPA-inducible consensus sequence elements

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5344538

A role for mucosal IL-22 production and Th22 cells in HIV-associated mucosal immunopathogenesis.

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5344538

Memory CCR6+CD4+ T cells are preferential targets for productive HIV type 1 infection regardless of their expression of integrin β7.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5344538

Use of mixture models in a microarray-based screening procedure for detecting differentially represented yeast mutants

22 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28241075

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Human intestinal lamina propria CD1c+ dendritic cells display an activated phenotype at steady state and produce IL-23 in response to TLR7/8 stimulation

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28241075

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PPAT.1006226

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28241075%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28241075%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

PubMed publication ID

28241075

1 reference