(Q36297259)

13 August 2017

Scaffolder - software for manual genome scaffolding (English)

1 reference

13 August 2017

0 references

Michael D Barton

1

1 reference

13 August 2017

Hazel A Barton

series ordinal

2

1 reference

13 August 2017

language of work or name

English

0 references

publication date

28 May 2012

1 reference

Source Code for Biology and Medicine

13 August 2017

1 reference

13 August 2017

7

1 reference

13 August 2017

1

1 reference

13 August 2017

4

1 reference

Creative Commons Attribution 2.0 Generic

13 August 2017

start time

28 May 2012

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

1 reference

April 2022 Public Data File from Crossref

cites work

Scaffolding pre-assembled contigs using SSPACE

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3464138

An algorithm for automated closure during assembly

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3464138

BioRuby: bioinformatics software for the Ruby programming language

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3464138

SOPRA: Scaffolding algorithm for paired reads via statistical optimization

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3464138

Finishing genomes with limited resources: lessons from an ensemble of microbial genomes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3464138

Improving draft assemblies by iterative mapping and assembly of short reads to eliminate gaps

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3464138

Assembly algorithms for next-generation sequencing data

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3464138

Genome assembly reborn: recent computational challenges

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3464138

A new pheromone trail-based genetic algorithm for comparative genome assembly

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3464138

Bioinformatics challenges of new sequencing technology

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3464138

Hierarchical scaffolding with Bambus

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3464138

On the high value of low standards

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3464138

The value of complete microbial genome sequencing (you get what you pay for).

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3464138

Automated finishing with autofinish

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3464138

ABACAS: algorithm-based automatic contiguation of assembled sequences

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3464138

The importance of complete genome sequences

29 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1751-0473-7-4

OSLay: optimal syntenic layout of unfinished assemblies.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1751-0473-7-4

The impact of next-generation sequencing technology on genetics

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3464138

EULER-PCR: finishing experiments for repeat resolution.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3464138

22 September 2018

Identifiers

DOI

10.1186/1751-0473-7-4

1 reference

13 August 2017

journals/scfbm/BartonB12

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

13 August 2017

PubMed publication ID

22640820

1 reference