(Q36302542)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28278228%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

title

BIDS apps: Improving ease of use, accessibility, and reproducibility of neuroimaging data analysis methods (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28278228%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

0 references

0 references

1 reference

1

1 reference

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5 April 2020

Tal Yarkoni

28

1 reference

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5 April 2020

Russell A. Poldrack

29

1 reference

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5 April 2020

Fidel Alfaro-Almagro

2

1 reference

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5 April 2020

Pierre Bellec

4

1 reference

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5 April 2020

Mihai Capotă

5

1 reference

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5 April 2020

Mallar Chakravarty

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28278228%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

Alexander L. Cohen

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28278228%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

R. Cameron Craddock

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28278228%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

Gabriel A Devenyi

10

1 reference

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5 April 2020

Anders Eklund

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28278228%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

Oscar Esteban

12

1 reference

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5 April 2020

Satrajit S. Ghosh

14

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28278228%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

J. Swaroop Guntupalli

15

1 reference

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5 April 2020

Mark Jenkinson

16

1 reference

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5 April 2020

Anisha Keshavan

17

1 reference

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5 April 2020

Gregory Kiar

18

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28278228%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

Franziskus Liem

19

1 reference

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5 April 2020

Pradeep Reddy Raamana

20

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28278228%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

Christopher J. Steele

22

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28278228%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

Robert E Smith

24

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28278228%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

Stephen C. Strother

25

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28278228%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

Yida Wang

27

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28278228%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

26

Gaël Varoquaux

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28278228%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

author name string

Tibor Auer

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28278228%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

David Raffelt

21

1 reference

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5 April 2020

Pierre-Olivier Quirion

23

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28278228%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

Nathan W Churchill

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28278228%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

Guillaume Flandin

13

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28278228%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

publication date

9 March 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28278228%20AND%20SRC:MED&resulttype=core&format=json

PLOS Computational Biology

5 April 2020

published in

1 reference

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5 April 2020

volume

13

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28278228%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

issue

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28278228%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

page(s)

e1005209

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28278228%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

5 April 2020

copyright license

start time

9 March 2017

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Science in the cloud (SIC): A use case in MRI connectomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

Bringing your tools to CyVerse Discovery Environment using Docker

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

Investigating white matter fibre density and morphology using fixel-based analysis

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

A Model of Representational Spaces in Human Cortex

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

BioShaDock: a community driven bioinformatics shared Docker-based tools registry

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

Bioboxes: standardised containers for interchangeable bioinformatics software

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

The impact of Docker containers on the performance of genomic pipelines

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

An Automated, Adaptive Framework for Optimizing Preprocessing Pipelines in Task-Based Functional MRI

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

Connectivity-based fixel enhancement: Whole-brain statistical analysis of diffusion MRI measures in the presence of crossing fibres

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

Reproducibility of neuroimaging analyses across operating systems

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

Automatic analysis (aa): efficient neuroimaging workflows and parallel processing using Matlab and XML

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

Striatal shape abnormalities as novel neurodevelopmental endophenotypes in schizophrenia: a longitudinal study.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

CBRAIN: a web-based, distributed computing platform for collaborative neuroimaging research

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

Multi-atlas segmentation of the whole hippocampus and subfields using multiple automatically generated templates

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

BROCCOLI: Software for fast fMRI analysis on many-core CPUs and GPUs

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

Machine learning for neuroimaging with scikit-learn

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

Resting-state fMRI in the Human Connectome Project

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

The minimal preprocessing pipelines for the Human Connectome Project

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

A test-retest fMRI dataset for motor, language and spatial attention functions

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

101 labeled brain images and a consistent human cortical labeling protocol

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

Open is Not Enough. Let's Take the Next Step: An Integrated, Community-Driven Computing Platform for Neuroscience

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

The effects of FreeSurfer version, workstation type, and Macintosh operating system version on anatomical volume and cortical thickness measurements

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

The iPlant Collaborative: Cyberinfrastructure for Plant Biology

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

Performing label-fusion-based segmentation using multiple automatically generated templates

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

The pipeline system for Octave and Matlab (PSOM): a lightweight scripting framework and execution engine for scientific workflows

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

Within-subject template estimation for unbiased longitudinal image analysis

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

Cloud BioLinux: pre-configured and on-demand bioinformatics computing for the genomics community

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

Optimizing preprocessing and analysis pipelines for single-subject fMRI: 2. Interactions with ICA, PCA, task contrast and inter-subject heterogeneity

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

Automated probabilistic reconstruction of white-matter pathways in health and disease using an atlas of the underlying anatomy

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

Nipype: a flexible, lightweight and extensible neuroimaging data processing framework in python

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

CloVR: a virtual machine for automated and portable sequence analysis from the desktop using cloud computing

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

Neuroscience Runs on GNU/Linux

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

Optimizing preprocessing and analysis pipelines for single-subject fMRI. I. Standard temporal motion and physiological noise correction methods

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

Provenance in neuroimaging

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

The Extensible Neuroimaging Archive Toolkit: an informatics platform for managing, exploring, and sharing neuroimaging data

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

The quantitative evaluation of functional neuroimaging experiments: the NPAIRS data analysis framework

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

A purely confirmatory replication study of structural brain-behavior correlations.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

The effects of SIFT on the reproducibility and biological accuracy of the structural connectome.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

Derivation of high-resolution MRI atlases of the human cerebellum at 3T and segmentation using multiple automatically generated templates.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5363996

10.1371/JOURNAL.PCBI.1005209

22 September 2018

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28278228%20AND%20SRC:MED&resulttype=core&format=json

journals/ploscb/GorgolewskiAABC17

5 April 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28278228%20AND%20SRC:MED&resulttype=core&format=json

5 April 2020

1 reference