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An rbcL reference library to aid in the identification of plant species mixtures by DNA metabarcoding.
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scholarly article
1 reference
stated in
Europe PubMed Central
PMC publication ID
5357121
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28337390%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 March 2020
title
An rbcL reference library to aid in the identification of plant species mixtures by DNA metabarcoding
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
5357121
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28337390%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 March 2020
main subject
metabarcoding
0 references
author
Karen L Bell
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
5357121
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28337390%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 March 2020
Berry J. Brosi
series ordinal
3
1 reference
stated in
Europe PubMed Central
PMC publication ID
5357121
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28337390%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 March 2020
author name string
Virginia M Loeffler
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMC publication ID
5357121
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28337390%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 March 2020
publication date
10 March 2017
1 reference
stated in
Europe PubMed Central
PMC publication ID
5357121
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28337390%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 March 2020
published in
Applications in Plant Sciences
1 reference
stated in
Europe PubMed Central
PMC publication ID
5357121
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28337390%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 March 2020
volume
5
1 reference
stated in
Europe PubMed Central
PMC publication ID
5357121
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28337390%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 March 2020
issue
3
1 reference
stated in
Europe PubMed Central
PMC publication ID
5357121
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28337390%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 March 2020
describes a project that uses
DNA metabarcoding
1 reference
based on heuristic
inferred from title
cites work
Pollen DNA barcoding: current applications and future prospects.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5357121
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30 September 2017
Using metabarcoding to reveal and quantify plant-pollinator interactions
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5357121
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30 September 2017
Review and future prospects for DNA barcoding methods in forensic palynology.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5357121
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30 September 2017
Rank-based characterization of pollen assemblages collected by honey bees using a multi-locus metabarcoding approach
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5357121
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30 September 2017
DNA data bank of Japan (DDBJ) progress report
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5357121
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30 September 2017
Using DNA Metabarcoding to Identify the Floral Composition of Honey: A New Tool for Investigating Honey Bee Foraging Preferences
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5357121
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30 September 2017
ITS2 Database V: Twice as Much
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5357121
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30 September 2017
Increased efficiency in identifying mixed pollen samples by meta-barcoding with a dual-indexing approach
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5357121
retrieved
30 September 2017
The EBI Search engine: providing search and retrieval functionality for biological data from EMBL-EBI
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5357121
retrieved
30 September 2017
Application of ITS2 metabarcoding to determine the provenance of pollen collected by honey bees in an agroecosystem.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5357121
retrieved
30 September 2017
Evaluating multiplexed next-generation sequencing as a method in palynology for mixed pollen samples
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5357121
retrieved
30 September 2017
From barcoding single individuals to metabarcoding biological communities: towards an integrative approach to the study of global biodiversity.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5357121
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30 September 2017
Efficient and sensitive identification and quantification of airborne pollen using next-generation DNA sequencing.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5357121
retrieved
30 September 2017
Biological ingredient analysis of traditional Chinese medicine preparation based on high-throughput sequencing: the story for Liuwei Dihuang Wan.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5357121
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30 September 2017
Development of a dual-index sequencing strategy and curation pipeline for analyzing amplicon sequence data on the MiSeq Illumina sequencing platform.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5357121
retrieved
30 September 2017
Soft fruit traceability in food matrices using real-time PCR.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5357121
retrieved
30 September 2017
Who is eating what: diet assessment using next generation sequencing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5357121
retrieved
30 September 2017
Selecting barcoding loci for plants: evaluation of seven candidate loci with species-level sampling in three divergent groups of land plants
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5357121
retrieved
30 September 2017
New perspectives in diet analysis based on DNA barcoding and parallel pyrosequencing: the trnL approach
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5357121
retrieved
30 September 2017
Search and clustering orders of magnitude faster than BLAST
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5357121
retrieved
30 September 2017
QIIME allows analysis of high-throughput community sequencing data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5357121
retrieved
30 September 2017
Validation of the ITS2 region as a novel DNA barcode for identifying medicinal plant species
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5357121
retrieved
30 September 2017
Plant DNA barcodes and a community phylogeny of a tropical forest dynamics plot in Panama
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5357121
retrieved
30 September 2017
A DNA barcode for land plants
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5357121
retrieved
30 September 2017
BARCODING: bold: The Barcode of Life Data System (http://www.barcodinglife.org)
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5357121
retrieved
30 September 2017
Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5357121
retrieved
30 September 2017
A two-locus global DNA barcode for land plants: the coding rbcL gene complements the non-coding trnH-psbA spacer region
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5357121
retrieved
30 September 2017
GenBank
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5357121
retrieved
21 October 2018
Discriminating plant species in a local temperate flora using the rbcL+matK DNA barcode
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.3732%2FAPPS.1600110
retrieved
21 January 2018
Identifiers
DOI
10.3732/APPS.1600110
1 reference
stated in
Europe PubMed Central
PMC publication ID
5357121
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28337390%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 March 2020
PMC publication ID
5357121
1 reference
stated in
Europe PubMed Central
PMC publication ID
5357121
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28337390%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 March 2020
PubMed publication ID
28337390
1 reference
stated in
Europe PubMed Central
PMC publication ID
5357121
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28337390%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 March 2020
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