(Q36373890)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28513628%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

title

An integrated model for detecting significant chromatin interactions from high-resolution Hi-C data (English)

1 reference

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20 March 2020

2

1 reference

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20 March 2020

Merve Sahin

3

1 reference

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20 March 2020

author name string

Mark Carty

1

1 reference

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20 March 2020

Alvaro González

4

1 reference

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20 March 2020

Raphael Pelossof

5

1 reference

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20 March 2020

Christina S Leslie

7

1 reference

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20 March 2020

Olivier Elemento

6

1 reference

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20 March 2020

language of work or name

English

0 references

publication date

17 May 2017

1 reference

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20 March 2020

published in

Nature Communications

1 reference

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20 March 2020

volume

8

1 reference

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20 March 2020

page(s)

15454

1 reference

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Creative Commons Attribution 4.0 International

20 March 2020

copyright license

start time

17 May 2017

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

exact match

https://scigraph.springernature.com/pub.10.1038/ncomms15454

0 references

cites work

CHiCAGO: robust detection of DNA looping interactions in Capture Hi-C data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5442359

A hidden Markov random field-based Bayesian method for the detection of long-range chromosomal interactions in Hi-C data.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5442359

FourCSeq: analysis of 4C sequencing data

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5442359

Computational and analytical challenges in single-cell transcriptomics

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5442359

A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5442359

Statistical confidence estimation for Hi-C data reveals regulatory chromatin contacts

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5442359

From single-cell to cell-pool transcriptomes: stochasticity in gene expression and RNA splicing.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5442359

HiCNorm: removing biases in Hi-C data via Poisson regression

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5442359

Iterative correction of Hi-C data reveals hallmarks of chromosome organization

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5442359

The control of histone gene expression.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5442359

Topological domains in mammalian genomes identified by analysis of chromatin interactions

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5442359

Unsupervised pattern discovery in human chromatin structure through genomic segmentation

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5442359

ChromHMM: automating chromatin-state discovery and characterization

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5442359

Three-dimensional folding and functional organization principles of the Drosophila genome

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5442359

Mapping of long-range associations throughout the fission yeast genome reveals global genome organization linked to transcriptional regulation

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5442359

The Cajal body and histone locus body

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5442359

A three-dimensional model of the yeast genome

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5442359

Comprehensive mapping of long-range interactions reveals folding principles of the human genome

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5442359

Probabilistic modeling of Hi-C contact maps eliminates systematic biases to characterize global chromosomal architecture.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5442359

21 September 2018

Identifiers

DOI

10.1038/NCOMMS15454

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28513628%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28513628%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

PubMed publication ID

28513628

1 reference