(Q36378013)

13 August 2017

Developmental features of DNA methylation during activation of the embryonic zebrafish genome (English)

1 reference

13 August 2017

0 references

0 references

Ingrid S Andersen

1

1 reference

13 August 2017

Andrew H Reiner

2

1 reference

13 August 2017

Håvard Aanes

3

1 reference

13 August 2017

Peter Aleström

4

1 reference

13 August 2017

Philippe Collas

5

1 reference

13 August 2017

language of work or name

1 reference

25 July 2012

1 reference

13 August 2017

1 reference

13 August 2017

13

1 reference

13 August 2017

7

1 reference

13 August 2017

R65

1 reference

https://scigraph.springernature.com/pub.10.1186/gb-2012-13-7-r65

13 August 2017

0 references

cites work

Dynamic CpG island methylation landscape in oocytes and preimplantation embryos

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3491385

Temporal uncoupling of the DNA methylome and transcriptional repression during embryogenesis

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3491385

Zebrafish mRNA sequencing deciphers novelties in transcriptome dynamics during maternal to zygotic transition

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3491385

Identification of cis regulatory features in the embryonic zebrafish genome through large-scale profiling of H3K4me1 and H3K4me3 binding sites

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3491385

Genes for embryo development are packaged in blocks of multivalent chromatin in zebrafish sperm

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3491385

Tiling histone H3 lysine 4 and 27 methylation in zebrafish using high-density microarrays

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3491385

Orphan CpG islands identify numerous conserved promoters in the mammalian genome

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3491385

CpG island clusters and pro-epigenetic selection for CpGs in protein-coding exons of HOX and other transcription factors

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3491385

Promoter DNA methylation patterns of differentiated cells are largely programmed at the progenitor stage

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3491385

CpG islands influence chromatin structure via the CpG-binding protein Cfp1.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3491385

Chromatin states of developmentally-regulated genes revealed by DNA and histone methylation patterns in zebrafish embryos.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3491385

Chromatin signature of embryonic pluripotency is established during genome activation

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3491385

Dnmt3 and G9a cooperate for tissue-specific development in zebrafish

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3491385

A hierarchy of H3K4me3 and H3K27me3 acquisition in spatial gene regulation in Xenopus embryos.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3491385

Immunoprecipitation of methylated DNA.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3491385

DNA demethylation in zebrafish involves the coupling of a deaminase, a glycosylase, and gadd45.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3491385

A piRNA pathway primed by individual transposons is linked to de novo DNA methylation in mice

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3491385

Comparative analysis of CpG islands in four fish genomes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3491385

Small RNA guides for de novo DNA methylation in mammalian germ cells

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3491385

Systematic evaluation of variability in ChIP-chip experiments using predefined DNA targets

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3491385

DNMT3L connects unmethylated lysine 4 of histone H3 to de novo methylation of DNA

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3491385

Stability and flexibility of epigenetic gene regulation in mammalian development

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3491385

Distribution, silencing potential and evolutionary impact of promoter DNA methylation in the human genome

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3491385

Zebra fish Dnmt1 and Suv39h1 regulate organ-specific terminal differentiation during development

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3491385

BiQ Analyzer: visualization and quality control for DNA methylation data from bisulfite sequencing.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3491385

Transcriptome analysis of zebrafish embryogenesis using microarrays

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3491385

Comprehensive analysis of CpG islands in human chromosomes 21 and 22

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3491385

Transient depletion of xDnmt1 leads to premature gene activation in Xenopus embryos

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3491385

The zebrafish midblastula transition

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3491385

DNA methylation at promoter regions regulates the timing of gene activation in Xenopus laevis embryos

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3491385

Targets and dynamics of promoter DNA methylation during early mouse development.

28 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2FGB-2012-13-7-R65

Prepatterning of developmental gene expression by modified histones before zygotic genome activation.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2FGB-2012-13-7-R65

DNA methylation profiling in zebrafish.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3491385

Global changes in genomic methylation levels during early development of the zebrafish embryo.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3491385

Constitutive genomic methylation during embryonic development of Xenopus

21 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22830626

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

DNA methylation and structural and functional bimodality of vertebrate promoters

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22830626

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Divergence of CpG island promoters: a consequence or cause of evolution?

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22830626

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/GB-2012-13-7-R65

1 reference

Dimensions Publication ID

13 August 2017

0 references

1 reference

13 August 2017

PubMed publication ID

22830626

1 reference