(Q36393114)

English

Exploring subdomain cooperativity in T4 lysozyme II: uncovering the C-terminal subdomain as a hidden intermediate in the kinetic folding pathway

scientific article

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scholarly article

1 reference

Europe PubMed Central

13 August 2017

Exploring subdomain cooperativity in T4 lysozyme II: uncovering the C-terminal subdomain as a hidden intermediate in the kinetic folding pathway (English)

1 reference

Europe PubMed Central

13 August 2017

author name string

Jason Cellitti

1

1 reference

Europe PubMed Central

13 August 2017

Rachel Bernstein

2

1 reference

Europe PubMed Central

13 August 2017

Susan Marqusee

3

1 reference

Europe PubMed Central

13 August 2017

publication date

30 March 2007

1 reference

Europe PubMed Central

13 August 2017

Protein Science

1 reference

Europe PubMed Central

13 August 2017

16

1 reference

Europe PubMed Central

13 August 2017

5

1 reference

Europe PubMed Central

13 August 2017

852-862

1 reference

Europe PubMed Central

13 August 2017

Exploring subdomain cooperativity in T4 lysozyme I: Structural and energetic studies of a circular permutant and protein fragment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

30 September 2017

The folding pathway of T4 lysozyme: an on-pathway hidden folding intermediate

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

30 September 2017

Core domain interactions in full-length p53 in solution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

30 September 2017

Roles of static and dynamic domains in stability and catalysis of adenylate kinase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

30 September 2017

The Yin and Yang of protein folding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

30 September 2017

Natively unfolded proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

30 September 2017

Insights into enzyme structure and dynamics elucidated by amide H/D exchange mass spectrometry.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

30 September 2017

Structure, dynamics, and catalytic function of dihydrofolate reductase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

30 September 2017

The role of dynamics in allosteric regulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

30 September 2017

Protein aggregation and aggregate toxicity: new insights into protein folding, misfolding diseases and biological evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

30 September 2017

Non-linear rate-equilibrium free energy relationships and Hammond behavior in protein folding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

30 September 2017

Multiple methionine substitutions are tolerated in T4 lysozyme and have coupled effects on folding and stability

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

30 September 2017

Evidence for sequential barriers and obligatory intermediates in apparent two-state protein folding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

30 September 2017

Molecular chaperones as essential mediators of mitochondrial biogenesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

30 September 2017

Apparent two-state tendamistat folding is a sequential process along a defined route

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

30 September 2017

Characterisation of the transition states for protein folding: towards a new level of mechanistic detail in protein engineering analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

30 September 2017

Protein folding intermediates and pathways studied by hydrogen exchange

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

30 September 2017

Folding nuclei in 3D protein structures.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

30 September 2017

The speed limit for protein folding measured by triplet-triplet energy transfer.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

30 September 2017

Intermediates can accelerate protein folding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

30 September 2017

Structural changes in the transition state of protein folding: alternative interpretations of curved chevron plots

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

30 September 2017

Intermediate states in protein folding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

30 September 2017

Control of enzyme activity by an engineered disulfide bond

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

30 September 2017

A mutant T4 lysozyme displays five different crystal conformations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

30 September 2017

On-pathway versus off-pathway folding intermediates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

30 September 2017

Spectrin R16: broad energy barrier or sequential transition states?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

28 June 2018

The energetics of T4 lysozyme reveal a hierarchy of conformations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

28 June 2018

The response of T4 lysozyme to large-to-small substitutions within the core and its relation to the hydrophobic effect.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

28 June 2018

Subdomain interactions as a determinant in the folding and stability of T4 lysozyme

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

28 June 2018

Evidence for intermediates during unfolding and refolding of a two-domain protein: phage T4 lysozyme equilibrium and kinetic studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

28 June 2018

Low-temperature unfolding of a mutant of phage T4 lysozyme. 2. Kinetic investigations.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

28 June 2018

Detection and characterization of an early folding intermediate of T4 lysozyme using pulsed hydrogen exchange and two-dimensional NMR

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

28 June 2018

Kinetic coupling between protein folding and prolyl isomerization. I. Theoretical models

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

28 June 2018

An on-pathway hidden intermediate and the early rate-limiting transition state of Rd-apocytochrome b562 characterized by protein engineering

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

21 September 2018

The folding of spectrin domains II: phi-value analysis of R16.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

21 September 2018

The folding of spectrin domains I: wild-type domains have the same stability but very different kinetic properties.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

21 September 2018

Hammond behavior versus ground state effects in protein folding: evidence for narrow free energy barriers and residual structure in unfolded states.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

21 September 2018

The cooperativity of burst phase reactions explored

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

21 September 2018

Multiple kinetic intermediates accumulate during the unfolding of horse cytochrome c in the oxidized state.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

21 September 2018

The kinetic folding intermediate of ribonuclease H resembles the acid molten globule and partially unfolded molecules detected under native conditions.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2206637

21 September 2018

Rapid formation of secondary structure framework in protein folding studied by stopped-flow circular dichroism

1 reference

https://pubmed.ncbi.nlm.nih.gov/17400925

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Folding kinetics of T4 lysozyme and nine mutants at 12 degrees C

1 reference

https://pubmed.ncbi.nlm.nih.gov/17400925

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Movement of the position of the transition state in protein folding

1 reference

https://pubmed.ncbi.nlm.nih.gov/17400925

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Kinetic mechanism of folding and unfolding of Rhodobacter capsulatus cytochrome c2

1 reference

https://pubmed.ncbi.nlm.nih.gov/17400925

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inferred from PubMed ID database lookup

Folding intermediates of wild-type and mutants of barnase. I. Use of phi-value analysis and m-values to probe the cooperative nature of the folding pre-equilibrium

1 reference

https://pubmed.ncbi.nlm.nih.gov/17400925

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The changing nature of the protein folding transition state: implications for the shape of the free-energy profile for folding

1 reference

https://pubmed.ncbi.nlm.nih.gov/17400925

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Folding-unfolding equilibrium and kinetics of equine beta-lactoglobulin: equivalence between the equilibrium molten globule state and a burst-phase folding intermediate

1 reference

https://pubmed.ncbi.nlm.nih.gov/17400925

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Submillisecond unfolding kinetics of apomyoglobin and its pH 4 intermediate

1 reference

https://pubmed.ncbi.nlm.nih.gov/17400925

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1110/PS.062632807

1 reference

Europe PubMed Central

13 August 2017

1 reference

Europe PubMed Central

13 August 2017

1 reference

Europe PubMed Central

13 August 2017

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